G27552


Basic Information

Item Value
gene id G27552
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38439574 ~ 38439892 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34464
tagtcttctggcaccggaagactgcagtggtctggaggggatgtatggagagacgagtgactgaaggtagcttggtgcagtgtggtcgagacagcggtaggtgagggtcagtgtcttgaactgaatgtgtgccgctatcgggagccagtggagggagcggagcagtggagtagcgtgtgcgaatcggggcagagagaatagcagacgagccgcagagttctggatgagctggagcggcgggtagtagatgcaggcaggccggccaggagggagttgcagtagtccaggcggaagaggaccagtgactggacgagtcgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34464 True 319 lncRNA 0.59 1 38439574 38439892

Neighbor

gene id symbol gene type direction distance location
AMCG00007948 NA coding upstream 352823 38080756 ~ 38086751 (+)
AMCG00007951 LOC107385061,LOC106582629 coding upstream 368731 38067388 ~ 38070843 (+)
AMCG00007947 NA coding upstream 412724 38018892 ~ 38026850 (+)
AMCG00007950 NA coding upstream 424780 38011176 ~ 38014794 (+)
AMCG00007949 pigu coding upstream 428779 38002950 ~ 38010795 (+)
AMCG00007956 NA coding downstream 33824 38473716 ~ 38476488 (+)
AMCG00007959 pmepa1,LOC106582623 coding downstream 124583 38564475 ~ 38570223 (+)
AMCG00007965 NA coding downstream 136230 38576122 ~ 38605013 (+)
AMCG00007963 NA coding downstream 181230 38621122 ~ 38627736 (+)
AMCG00007964 NA coding downstream 196590 38636482 ~ 38661331 (+)
G27497 NA non-coding upstream 411651 38027380 ~ 38027923 (+)
G27489 NA non-coding upstream 422430 38016868 ~ 38017144 (+)
G27462 NA non-coding upstream 662112 37777065 ~ 37777462 (+)
G27400 blcap,bc10 non-coding upstream 940189 37495159 ~ 37499385 (+)
G27334 NA non-coding upstream 1346244 37092649 ~ 37093330 (+)
G27553 NA non-coding downstream 1644 38441536 ~ 38442071 (+)
G27561 NA non-coding downstream 41405 38481297 ~ 38482391 (+)
G27581 NA non-coding downstream 231979 38671871 ~ 38729032 (+)
G27648 NA non-coding downstream 352557 38792449 ~ 38834594 (+)
G27667 NA non-coding downstream 415639 38855531 ~ 38855767 (+)
G27551 NA other upstream 2979 38432045 ~ 38436595 (+)
AMCG00007957 raly other upstream 16419 38355929 ~ 38423155 (+)
AMCG00007952 romo1,LOC102788570 other upstream 269428 38168570 ~ 38170146 (+)
G27518 NA other upstream 292724 38144984 ~ 38146850 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 1223016 37203870 ~ 37216558 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 252847 38692739 ~ 38708915 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 1063187 39503079 ~ 39504377 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other downstream 1070519 39510411 ~ 39592411 (+)
AMCG00008010 NA other downstream 1100328 39540220 ~ 39545607 (+)
AMCG00008020 NA other downstream 1377135 39817027 ~ 39834952 (+)

Expression


Co-expression Network