G27709


Basic Information

Item Value
gene id G27709
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 39059531 ~ 39059734 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34674
CCTCTGaacctgtgtgtgagtgaagaTATAGACAAATAGACACGTACCCTGACTACCTGCTGCTTTGTGTGGTCTGCAGCCCACATCCTCCCATACTGCAGGACAGATGTTTTCAAACAGCCAAACCACAGGACAGATGCAAGTGCGCAAAGCACCCCCTGCATTTTGttatgtgtgcatttatttattgattttggttttaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34674 True 204 lncRNA 0.45 1 39059531 39059734

Neighbor

gene id symbol gene type direction distance location
AMCG00007987 LOC107703109 coding upstream 6611 39050962 ~ 39052920 (+)
AMCG00007986 NA coding upstream 46680 39004001 ~ 39012851 (+)
AMCG00007980 NA coding upstream 133860 38921036 ~ 38925671 (+)
AMCG00007978 prelid3b,LOC108231491 coding upstream 141555 38909285 ~ 38917976 (+)
AMCG00007981 NA coding upstream 155020 38900328 ~ 38904511 (+)
AMCG00007985 fam210b,LOC102797503 coding downstream 913 39060647 ~ 39069306 (+)
AMCG00007991 NA coding downstream 44441 39104175 ~ 39112999 (+)
AMCG00007998 NA coding downstream 178314 39238048 ~ 39239628 (+)
AMCG00008001 sox4,LOC108255020,LOC107732138,LOC107722246 coding downstream 317244 39376978 ~ 39378054 (+)
AMCG00008004 NA coding downstream 351956 39411690 ~ 39413775 (+)
G27708 NA non-coding upstream 3904 39054539 ~ 39055627 (+)
G27670 NA non-coding upstream 151349 38906054 ~ 38908182 (+)
G27667 NA non-coding upstream 203764 38855531 ~ 38855767 (+)
G27648 NA non-coding upstream 224937 38792449 ~ 38834594 (+)
G27581 NA non-coding upstream 330499 38671871 ~ 38729032 (+)
G27760 LOC105912234,LOC101475128,LOC102305233,LOC102193169,LOC107093176,LOC103134693 non-coding downstream 146647 39206381 ~ 39208293 (+)
G27781 NA non-coding downstream 206688 39266422 ~ 39266673 (+)
G27788 NA non-coding downstream 231234 39290968 ~ 39291221 (+)
G27881 slc12a5b,LOC107725712,LOC107550951,LOC107747216,LOC107683884 non-coding downstream 544878 39604612 ~ 39604828 (+)
G27960 NA non-coding downstream 898253 39957987 ~ 40003700 (+)
AMCG00007970 rab22a,LOC107596793 other upstream 350616 38692739 ~ 38708915 (+)
G27551 NA other upstream 622936 38432045 ~ 38436595 (+)
AMCG00007957 raly other upstream 636376 38355929 ~ 38423155 (+)
AMCG00007952 romo1,LOC102788570 other upstream 889385 38168570 ~ 38170146 (+)
G27518 NA other upstream 912681 38144984 ~ 38146850 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 443345 39503079 ~ 39504377 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other downstream 450677 39510411 ~ 39592411 (+)
AMCG00008010 NA other downstream 480486 39540220 ~ 39545607 (+)
AMCG00008020 NA other downstream 757293 39817027 ~ 39834952 (+)
G27974 NA other downstream 996898 40056632 ~ 40059386 (+)

Expression


Co-expression Network