G28203


Basic Information

Item Value
gene id G28203
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41018244 ~ 41019422 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU35308
ACCagcagattattatttattgtggaaCCTTACAAGGTCCATAgctgttaaaaacataaatgcaatataatttaacatacacaccaattttattttaaatgctaccTCATTTCTAAATCCCCTGAAACATAAATGCACATCTTACAAAAGCACACAGGaagctgaaaaaagaaaaagacaaaatatatatatgacaagCAAAAGCATTCAGGGAAACTGAGATGGGTATACAGAGGAATTTCTATTGGAGATGCAGTCTTTTGAAGATATTGATTTGTGTATGCATCGCTCAGCTGCAATTCCATTGGGCTTCTTGGACAAAAGACTCTGGGAAaataacccccccacacacacccccccaaGCAGCAACCATACTGAACAAGCCAGAATACTACAGCTTCAGATTAACCCCTCACAGACCCAATGTTATGAGCTCCTGTGTAAACAGAATTCAGCTGAATGAACacgatacaaaaataaataagtaacattTTGCAAAAGCAGTAAAAAGGATGACATTCCTGTAGCATAAGCACAAAATATTGATCCTGGAAAATATGacgaaaacaaaggaaatgatGAGACATGACATTTCAGATTCCCCACGGGATGAGGttaagaataatattaatacaccAAATCACAGGGTCCCAGTACAGCCAACACTCCTCTGCGTACCAGTTTCGGAAGtgctaattttaaaattaattataaaaagcTTGTATGTTTACATGCAAGTTTATATGTCAAGGCACCAGTTTCTTCAAATGCTTTCTCCAAGAGCTCCATCTTGTGGCTTCCGACCAACAGTGCATATAAACCGAGGATCTGTTAATCTGACATTTTgacagaggtggaaagagtactaaaaaatcctactcaagAAGAAGTACTGTAACTGATGAAATgttactcaagtaaaagtaaaagtactggtaaAAAATAGCtacaagtaaaagtaaaaagcagCTCAtttacatagttacttttatcaaagcattgtcacatgatctccaagcaaacactaacacacacacacacacacacatattatatacagtactgtgcaaaagtcttaggcaggtgtgaaaaaatgctgtctatttttgaaaacattcttactttacatgttaatagattatatttatcaataaactaaatgcaaagtgagtgaacaga

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU35308 True 1179 lncRNA 0.35 1 41018244 41019422

Neighbor

gene id symbol gene type direction distance location
AMCG00008058 NA coding downstream 35554 40981896 ~ 40982690 (-)
AMCG00008053 NA coding downstream 142807 40868653 ~ 40875437 (-)
AMCG00008056 NA coding downstream 169495 40847002 ~ 40848749 (-)
AMCG00008054 LOC105022343,LOC103467740,LOC106572463,LOC103385599,LOC106567217 coding downstream 189728 40819849 ~ 40828516 (-)
AMCG00008055 NA coding downstream 248920 40755783 ~ 40769324 (-)
AMCG00008063 NA coding upstream 36704 41056126 ~ 41078139 (-)
AMCG00008066 NA coding upstream 67526 41086948 ~ 41095005 (-)
AMCG00008068 lama5,LOC107666435 coding upstream 109494 41128916 ~ 41189631 (-)
AMCG00008067 NA coding upstream 183486 41202908 ~ 41219672 (-)
AMCG00008072 LOC106566342 coding upstream 200894 41220316 ~ 41229073 (-)
G28190 NA non-coding downstream 33340 40983619 ~ 40984904 (-)
G28139 NA non-coding downstream 267801 40748306 ~ 40750443 (-)
G28119 NA non-coding downstream 350382 40663917 ~ 40667862 (-)
G28110 NA non-coding downstream 354484 40659881 ~ 40663760 (-)
G28095 NA non-coding downstream 385480 40627777 ~ 40632764 (-)
G28206 NA non-coding upstream 24274 41043696 ~ 41044047 (-)
G28241 NA non-coding upstream 109716 41129138 ~ 41129628 (-)
G28308 NA non-coding upstream 340722 41360144 ~ 41360468 (-)
G28309 NA non-coding upstream 345340 41364762 ~ 41366616 (-)
G28325 NA non-coding upstream 607939 41627361 ~ 41627752 (-)
G28202 NA other downstream 996 41016159 ~ 41017248 (-)
AMCG00008042 NA other downstream 729670 40268272 ~ 40288574 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other downstream 1513652 39500321 ~ 39504592 (-)
AMCG00007993 dynlrb1,LOC106565026 other downstream 1926349 39088557 ~ 39091895 (-)
G27720 NA other downstream 1962565 39054153 ~ 39055679 (-)
AMCG00008069 rps21 other upstream 180067 41199489 ~ 41201825 (-)
AMCG00008076 NA other upstream 386369 41405791 ~ 41412224 (-)
AMCG00008085 NA other upstream 827511 41846933 ~ 41849954 (-)
AMCG00008095 NA other upstream 1064052 42083474 ~ 42089493 (-)
AMCG00008104 samd10 other upstream 1340478 42359900 ~ 42401074 (-)

Expression


Co-expression Network