G28366


Basic Information

Item Value
gene id G28366
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41826442 ~ 41826766 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU35523
GCTCTGAAGGAGGGCCAGGTCTGCCATTTTCGAATCCGTCGAACGTCCATTGGTGCATACTATGTGTCTGATAAGCTACAGTTTGCTACACTGAAGGAACTGATTTGTTATTACCAAACCAACTGGAAGAGCCTAGGAGTGCCTTTATCCCAACCTTGCAAAGAAAAGGTATGTAGCAAACATGTATACTACCCAACATCCTTGGACTTATTTTCCTGTCGTGGCAAATATTGAAGGCGTTTGAGCTACTCAAAGGCTCCATTCTTGTTCAgtcaattgtattttatacttTCAGTCGTGTTCTTACTTTATAACTTCACTATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35523 True 325 lncRNA 0.41 1 41826442 41826766

Neighbor

gene id symbol gene type direction distance location
AMCG00008079 NA coding downstream 67570 41593802 ~ 41758872 (-)
AMCG00008078 npbwr2,LOC106572941,LOC106566359,LOC105026017,LOC107558229 coding downstream 232829 41592654 ~ 41593613 (-)
AMCG00008075 LOC108275976 coding downstream 448025 41368688 ~ 41378417 (-)
AMCG00008073 NA coding downstream 486754 41335578 ~ 41339688 (-)
AMCG00008074 NA coding downstream 515882 41310009 ~ 41310560 (-)
AMCG00008086 NA coding upstream 24442 41851208 ~ 41870711 (-)
AMCG00008089 NA coding upstream 99079 41925845 ~ 41943588 (-)
AMCG00008091 NA coding upstream 150921 41977687 ~ 41997684 (-)
AMCG00008096 slc17a9b,slc17a9,LOC107563661,LOC107560897,LOC106566596 coding upstream 422880 42249646 ~ 42267791 (-)
AMCG00008101 NA coding upstream 468676 42295442 ~ 42299333 (-)
G28361 NA non-coding downstream 14368 41807778 ~ 41812074 (-)
G28325 NA non-coding downstream 198690 41627361 ~ 41627752 (-)
G28309 NA non-coding downstream 459826 41364762 ~ 41366616 (-)
G28308 NA non-coding downstream 465974 41360144 ~ 41360468 (-)
G28241 NA non-coding downstream 696814 41129138 ~ 41129628 (-)
G28377 NA non-coding upstream 16036 41842802 ~ 41843152 (-)
G28378 NA non-coding upstream 18190 41844956 ~ 41845987 (-)
G28410 NA non-coding upstream 264691 42091457 ~ 42092198 (-)
G28446 NA non-coding upstream 457193 42283959 ~ 42290245 (-)
G28456 NA non-coding upstream 474511 42301277 ~ 42302097 (-)
AMCG00008076 NA other downstream 414218 41405791 ~ 41412224 (-)
AMCG00008069 rps21 other downstream 624617 41199489 ~ 41201825 (-)
G28202 NA other downstream 809194 41016159 ~ 41017248 (-)
AMCG00008042 NA other downstream 1537868 40268272 ~ 40288574 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other downstream 2321850 39500321 ~ 39504592 (-)
AMCG00008085 NA other upstream 20167 41846933 ~ 41849954 (-)
AMCG00008095 NA other upstream 256708 42083474 ~ 42089493 (-)
AMCG00008104 samd10 other upstream 533134 42359900 ~ 42401074 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other upstream 934238 42761004 ~ 42764654 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other upstream 1270345 43097111 ~ 43120164 (-)

Expression


Co-expression Network