G28395


Basic Information

Item Value
gene id G28395
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41992859 ~ 41993377 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU35555
TGGGGAAAGAATGCAAGTGGAAGCCATCGATGGGTTTCCTGGGCAGCTCGTGGTTGCGGTGTGTGGAGAGCAGCTCTGTGCTGGAGTAGCGCGGCTCCTGCTCAGCGGCCTCGGCGCCCTTCtccggctgctgctgctgggcctTGTCGGCCTTTCTGACCTTGCGGATGCAGGCGTACTCGGCAGTCACCGCGTCCTGGGCCTGGGCCTTGGCGTTGGTGGGCGGGGCGCTGCCGTTGCCGTTGCCCTGGGGTGGGTTCTGAGGGTTGGGCTGGGGGGCAGCCGGTGGGGGCGCTGTGTCGGGCTCATTCCTACCCCCGACGCTCTCGTACAGAGCGTCCTCCGGAGCACGTGGCTGGGAAGAGTGTCGCCTCACCTCGGAGTAGGTGTGCTCTCTTTCCCCGGGAATCGGGGGGATCTTGGGCAGCTGCCTGCTCTGGGGGCACCGCAGGTCCCAGTCCGACTTACGGTTGGGCAGGTACAGGAGGTCCATGCTGGCTGGCCGGTTTTTGACCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35555 True 519 TUCP 0.67 1 41992859 41993377

Neighbor

gene id symbol gene type direction distance location
AMCG00008087 zbtb46 coding upstream 71548 41916706 ~ 41921311 (+)
AMCG00008088 NA coding upstream 77328 41908543 ~ 41915531 (+)
AMCG00008090 zbtb24,LOC106676336 coding upstream 98984 41892889 ~ 41893875 (+)
AMCG00008082 NA coding upstream 146849 41833262 ~ 41846010 (+)
AMCG00008084 NA coding upstream 159967 41826740 ~ 41832892 (+)
AMCG00008093 LOC107724178,LOC107601334,LOC107696930,LOC108410586,LOC107594068 coding downstream 51427 42044804 ~ 42055393 (+)
AMCG00008094 NA coding downstream 78372 42071749 ~ 42072173 (+)
AMCG00008092 ythdf1,LOC108437571,LOC107668064,LOC107549989,LOC107549491,LOC107678560 coding downstream 98180 42091557 ~ 42100380 (+)
AMCG00008097 bhlhe23,LOC102799046,LOC107737661,LOC107560898 coding downstream 218995 42212372 ~ 42213085 (+)
AMCG00008098 dnajc5aa,LOC107668106,LOC108412505,LOC103036084,LOC107090698 coding downstream 286392 42279769 ~ 42289436 (+)
G28394 NA non-coding upstream 12775 41977259 ~ 41980084 (+)
G28332 NA non-coding upstream 56645 41846992 ~ 41936214 (+)
G28329 NA non-coding upstream 264426 41728212 ~ 41728433 (+)
G28327 NA non-coding upstream 297151 41695354 ~ 41695708 (+)
G28303 NA non-coding upstream 604075 41388583 ~ 41388784 (+)
G28416 NA non-coding downstream 113490 42106867 ~ 42110075 (+)
G28421 NA non-coding downstream 124544 42117921 ~ 42186382 (+)
G28511 NA non-coding downstream 507297 42500674 ~ 42500981 (+)
G28527 NA non-coding downstream 590855 42584232 ~ 42586668 (+)
G28548 NA non-coding downstream 628573 42621950 ~ 42622157 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 1271114 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 1745621 40241312 ~ 40247238 (+)
G27974 NA other upstream 1933473 40056632 ~ 40059386 (+)
AMCG00008020 NA other upstream 2157907 39817027 ~ 39834952 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other upstream 2400448 39510411 ~ 39592411 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other downstream 420255 42413632 ~ 42437228 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 1112336 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 1151428 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 1299219 43292596 ~ 43305530 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 3029771 45023148 ~ 45036416 (+)

Expression


Co-expression Network