G28532


Basic Information

Item Value
gene id G28532
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42522805 ~ 42594860 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU35727
AAGACAATGTCAGTGCAGAGTCACCGCCCATGAAATGGAGTCTCTTCCAGATCATCATCCACACATTCCCTGCTCAGTGTCACGCTCAGCATATCCATTTCTACTGATGCCATTTGCCCTATGTGAACTTAAAATTGTGTGTTCTATTGCATATCTTGTTAATTATTGAGATTTGTATgatggattgttttgtttttttaagttgaaaTCTGCCAATAAaggaaactttaaaatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35727 True 236 lncRNA 0.36 2 42522805 42594860

Neighbor

gene id symbol gene type direction distance location
AMCG00008103 NA coding downstream 168173 42331139 ~ 42354632 (-)
AMCG00008100 uckl1b,uckl1,LOC108411658,LOC107723126 coding downstream 192327 42310632 ~ 42330478 (-)
AMCG00008101 NA coding downstream 223472 42295442 ~ 42299333 (-)
AMCG00008096 slc17a9b,slc17a9,LOC107563661,LOC107560897,LOC106566596 coding downstream 255014 42249646 ~ 42267791 (-)
AMCG00008091 NA coding downstream 525121 41977687 ~ 41997684 (-)
AMCG00008112 NA coding upstream 103277 42698137 ~ 42704412 (-)
AMCG00008114 NA coding upstream 170133 42764993 ~ 42808108 (-)
AMCG00008118 dhx35,LOC102790768 coding upstream 420496 43015356 ~ 43028990 (-)
AMCG00008117 NA coding upstream 434996 43029856 ~ 43036431 (-)
AMCG00008122 clg20h20orf24,LOC105904298,LOC105926099,LOC104925093,LOC102790476 coding upstream 444538 43039398 ~ 43043630 (-)
G28512 NA non-coding downstream 21809 42500677 ~ 42500996 (-)
G28509 NA non-coding downstream 45815 42475720 ~ 42476990 (-)
G28456 NA non-coding downstream 220708 42301277 ~ 42302097 (-)
G28446 NA non-coding downstream 232560 42283959 ~ 42290245 (-)
G28410 NA non-coding downstream 430607 42091457 ~ 42092198 (-)
G28900 NA non-coding upstream 1268747 43863607 ~ 43893808 (-)
G28907 NA non-coding upstream 1299319 43894179 ~ 43895951 (-)
G28914 NA non-coding upstream 1401258 43996118 ~ 44000866 (-)
G28973 NA non-coding upstream 1892350 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 2071483 44666343 ~ 44666577 (-)
AMCG00008104 samd10 other downstream 121731 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 433312 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 672851 41846933 ~ 41849954 (-)
AMCG00008076 NA other downstream 1110581 41405791 ~ 41412224 (-)
AMCG00008069 rps21 other downstream 1320980 41199489 ~ 41201825 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other upstream 166144 42761004 ~ 42764654 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other upstream 502251 43097111 ~ 43120164 (-)
AMCG00008144 phf20,LOC107727854 other upstream 915900 43510760 ~ 43583413 (-)
G28970 NA other upstream 1823014 44417874 ~ 44418196 (-)
AMCG00008192 NA other upstream 2554641 45149501 ~ 45228504 (-)

Expression


Co-expression Network