G28970


Basic Information

Item Value
gene id G28970
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44417874 ~ 44418196 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36269
gagctgagattaggagcactctcttaaagggagtgctcctaatctcagctcgttacctgcataaaagacacctgtccacagaagcaatcaatcaatcagagtcaaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgctaagcagcttggtgagaaggtgacaacagttggtgggATTATTCGCAAacggaagaaacacaaaattacTGTCAGtgtccctcggtctggggctccatgcaagatctcaccccGTGGAGTT

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36269 True 323 TUCP 0.49 1 44417874 44418196

Neighbor

gene id symbol gene type direction distance location
AMCG00008158 NA coding downstream 335026 44073663 ~ 44082848 (-)
AMCG00008159 col9a3 coding downstream 345889 44044933 ~ 44071985 (-)
AMCG00008151 LOC106519038,LOC106571933,LOC103357347,LOC104951675 coding downstream 445574 43962078 ~ 43972300 (-)
AMCG00008152 ncoa3,LOC107090280 coding downstream 495846 43897216 ~ 43922028 (-)
AMCG00008148 mrgbp,LOC106566471 coding downstream 741497 43666568 ~ 43676377 (-)
AMCG00008164 NA coding upstream 303543 44721739 ~ 44740915 (-)
AMCG00008165 psma7,LOC106571922 coding upstream 330894 44749090 ~ 44752458 (-)
AMCG00008163 NA coding upstream 358457 44776653 ~ 44778533 (-)
AMCG00008166 NA coding upstream 360540 44778736 ~ 44786186 (-)
AMCG00008174 NA coding upstream 377730 44795926 ~ 44814080 (-)
G28914 NA non-coding downstream 417008 43996118 ~ 44000866 (-)
G28907 NA non-coding downstream 521923 43894179 ~ 43895951 (-)
G28900 NA non-coding downstream 524066 43863607 ~ 43893808 (-)
G28532 NA non-coding downstream 1823014 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 1916878 42500677 ~ 42500996 (-)
G28973 NA non-coding upstream 69014 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 248147 44666343 ~ 44666577 (-)
G28977 cdh4,LOC101161393 non-coding upstream 261620 44679816 ~ 44680042 (-)
G28978 NA non-coding upstream 263229 44681425 ~ 44681769 (-)
G28976 NA non-coding upstream 264241 44682437 ~ 44688175 (-)
AMCG00008144 phf20,LOC107727854 other downstream 834461 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 1297710 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 1653220 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 2016800 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 2328381 42083474 ~ 42089493 (-)
AMCG00008192 NA other upstream 731305 45149501 ~ 45228504 (-)
G29301 NA other upstream 1632499 46050695 ~ 46054346 (-)
G29361 NA other upstream 2062750 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 3161943 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 3248446 47666642 ~ 47918462 (-)

Expression


Co-expression Network