G28973


Basic Information

Item Value
gene id G28973
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44487210 ~ 44487419 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36272
aagtcagggattttgtaggcatatagtcaggtgtatgattaaacaattataccaaaaaggtgctaatgatcatcaattcaatatgtaggttgaaacacaatcattaactgaaacagaaacagctgtgtaggaggaataaaactgggtgaggaacaaccaaactcagctaacaaggtgaggttgctgaagacagtttactgtcaaaagtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36272 True 210 lncRNA 0.37 1 44487210 44487419

Neighbor

gene id symbol gene type direction distance location
AMCG00008158 NA coding downstream 404362 44073663 ~ 44082848 (-)
AMCG00008159 col9a3 coding downstream 415225 44044933 ~ 44071985 (-)
AMCG00008151 LOC106519038,LOC106571933,LOC103357347,LOC104951675 coding downstream 514910 43962078 ~ 43972300 (-)
AMCG00008152 ncoa3,LOC107090280 coding downstream 565182 43897216 ~ 43922028 (-)
AMCG00008148 mrgbp,LOC106566471 coding downstream 810833 43666568 ~ 43676377 (-)
AMCG00008164 NA coding upstream 234320 44721739 ~ 44740915 (-)
AMCG00008165 psma7,LOC106571922 coding upstream 261671 44749090 ~ 44752458 (-)
AMCG00008163 NA coding upstream 289234 44776653 ~ 44778533 (-)
AMCG00008166 NA coding upstream 291317 44778736 ~ 44786186 (-)
AMCG00008174 NA coding upstream 308507 44795926 ~ 44814080 (-)
G28914 NA non-coding downstream 486344 43996118 ~ 44000866 (-)
G28907 NA non-coding downstream 591259 43894179 ~ 43895951 (-)
G28900 NA non-coding downstream 593402 43863607 ~ 43893808 (-)
G28532 NA non-coding downstream 1892350 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 1986214 42500677 ~ 42500996 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 178924 44666343 ~ 44666577 (-)
G28977 cdh4,LOC101161393 non-coding upstream 192397 44679816 ~ 44680042 (-)
G28978 NA non-coding upstream 194006 44681425 ~ 44681769 (-)
G28976 NA non-coding upstream 195018 44682437 ~ 44688175 (-)
G29081 NA non-coding upstream 547026 45034445 ~ 45036413 (-)
G28970 NA other downstream 69014 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 903797 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 1367046 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 1722556 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 2086136 42359900 ~ 42401074 (-)
AMCG00008192 NA other upstream 662082 45149501 ~ 45228504 (-)
G29301 NA other upstream 1563276 46050695 ~ 46054346 (-)
G29361 NA other upstream 1993527 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 3092720 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 3179223 47666642 ~ 47918462 (-)

Expression


Co-expression Network