G28991


Basic Information

Item Value
gene id G28991
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44768677 ~ 44816663 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36298
ggattgagaaccactgctgtaaACTGTACACTTAACTCAGACTTTCCTCCTACAGTGTATCATTCAGGGAAATGCAGATAATCAAGTCTATTAAAATGTCTGCTTTACTTATTGCACAATATGGGCTTCTGTGATGTACAGTCACCTCCAAAACTATTGGCAAATCTTAAATAAGGTGCATGTGACTATTTGTTAATTCACTTTGTAACCTTTAACTATactcacctaaaggattattaagaacacctgttcaatttctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36298 True 260 lncRNA 0.35 2 44768677 44816663

Neighbor

gene id symbol gene type direction distance location
AMCG00008169 ss18l1 coding upstream 7846 44753045 ~ 44760831 (+)
AMCG00008161 lsm14a,lsm14b,LOC105018105 coding upstream 20106 44743630 ~ 44748571 (+)
AMCG00008162 cdh4,LOC106571924 coding upstream 84977 44665636 ~ 44683700 (+)
AMCG00008167 NA coding upstream 114772 44577372 ~ 44653905 (+)
AMCG00008160 NA coding upstream 500354 44259975 ~ 44268323 (+)
AMCG00008171 NA coding downstream 129089 44945752 ~ 44949206 (+)
AMCG00008179 NA coding downstream 181566 44998229 ~ 45012622 (+)
AMCG00008178 rae1,LOC105026338 coding downstream 196102 45012765 ~ 45019906 (+)
AMCG00008181 NA coding downstream 290750 45107413 ~ 45121480 (+)
AMCG00008188 ttll9 coding downstream 411979 45228642 ~ 45232701 (+)
G28956 NA non-coding upstream 18769 44691541 ~ 44749908 (+)
G28931 col9a3,LOC106571930 non-coding upstream 712069 44053965 ~ 44056608 (+)
G28862 NA non-coding upstream 872726 43894109 ~ 43895951 (+)
G28678 NA non-coding upstream 1567474 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 1647896 43109050 ~ 43120781 (+)
G29148 NA non-coding downstream 537053 45353716 ~ 45354079 (+)
G29153 NA non-coding downstream 561348 45378011 ~ 45378353 (+)
G29223 NA non-coding downstream 723106 45539769 ~ 45542206 (+)
G29271 NA non-coding downstream 909320 45725983 ~ 45734261 (+)
G29291 NA non-coding downstream 1071286 45887949 ~ 45888412 (+)
AMCG00008132 NA other upstream 1463147 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 1612605 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 1660435 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 2331449 42413632 ~ 42437228 (+)
G28395 NA other upstream 2775300 41992859 ~ 41993377 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 206485 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 330734 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 523911 45340574 ~ 45343914 (+)
G29183 NA other downstream 623850 45440513 ~ 45441064 (+)
G29353 NA other downstream 1451228 46267891 ~ 46268327 (+)

Expression


Co-expression Network