G29153


Basic Information

Item Value
gene id G29153
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45378011 ~ 45378353 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36491
gcagcgtcttgtggtcgcgttctttccgcagttttgcacagctctgcagaaatccactgaccccattggtggagcagcgcagatctgcgctacacaaacgtgacctgtacatgtgcacgtccgtgtttgttgaccttttcgCTGTGgggatcacgcgtgtttctgcgagatttggaggctgtgacgcagatccacGACAAGGATGTCAGATCCGTCGTGTAGTGGGTGCTCCCCTGTGCTTAAGCGATCGTGTAGTGTGTGCTCCTTCACgacacaaaagacacaaattcggtgcaaaatagtcgttaagtgtgagctgcgcactgttcacaaaatcgtgtcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36491 True 343 lncRNA 0.52 1 45378011 45378353

Neighbor

gene id symbol gene type direction distance location
AMCG00008193 pigt,LOC106567380 coding upstream 41757 45328163 ~ 45336254 (+)
AMCG00008187 NA coding upstream 108179 45245953 ~ 45269832 (+)
AMCG00008186 NA coding upstream 135659 45239938 ~ 45242352 (+)
AMCG00008188 ttll9 coding upstream 145310 45228642 ~ 45232701 (+)
AMCG00008181 NA coding upstream 256531 45107413 ~ 45121480 (+)
AMCG00008200 NA coding downstream 22516 45400869 ~ 45408463 (+)
AMCG00008204 NA coding downstream 37924 45416277 ~ 45423427 (+)
AMCG00008205 NA coding downstream 65585 45443938 ~ 45468459 (+)
AMCG00008198 NA coding downstream 106277 45484630 ~ 45486967 (+)
AMCG00008210 NA coding downstream 110279 45488632 ~ 45488966 (+)
G29148 NA non-coding upstream 23932 45353716 ~ 45354079 (+)
G28991 NA non-coding upstream 561348 44768677 ~ 44816663 (+)
G28995 NA non-coding upstream 579548 44795924 ~ 44798463 (+)
G28956 NA non-coding upstream 628103 44691541 ~ 44749908 (+)
G28931 col9a3,LOC106571930 non-coding upstream 1321403 44053965 ~ 44056608 (+)
G29223 NA non-coding downstream 161416 45539769 ~ 45542206 (+)
G29271 NA non-coding downstream 347630 45725983 ~ 45734261 (+)
G29291 NA non-coding downstream 509596 45887949 ~ 45888412 (+)
G29320 NA non-coding downstream 714555 46092908 ~ 46093489 (+)
G29355 NA non-coding downstream 890322 46268675 ~ 46268989 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 34097 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 206183 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 341595 45023148 ~ 45036416 (+)
AMCG00008132 NA other upstream 2072481 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 2221939 43144805 ~ 43156072 (+)
G29183 NA other downstream 62160 45440513 ~ 45441064 (+)
G29353 NA other downstream 889538 46267891 ~ 46268327 (+)
G29418 NA other downstream 2201860 47580213 ~ 47586235 (+)
G29421 NA other downstream 2216751 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 2244599 47622952 ~ 47671421 (+)

Expression


Co-expression Network