G29223


Basic Information

Item Value
gene id G29223
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45539769 ~ 45542206 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36579
attttatttttccttaagaACCTTTAATAACTGTACAGTAAAAAGTTCACATGCTTCTTTCAAGGTTTACACTTTGGCAATAAAAGTGCAGTTCACCAAGAAATCTTACACATTGAGGGAGAAGTCCTTATCAGTGGCCAATACTCAATTGCTGGTCTCAAGGATCCAAAGGTATTAAAATGGTGCACAATAAGTGGACTTTGATGTGGCAATAAGGCAGGGGATTAACAATGGTCAAAGTTTCTAAACACAAACGCACCAGGGTTAGatttgggatttaaaaaaaaaaaaaaaaaactggatccattaaattaaatgctgtaCATATCGGAACAGCCACCACCcatattatttttcctctgGAGAGACATCCAATGTTTAACAGACACCAGGGCGCAGTGAATGCACAGGCACACCTACTATTCTACTGGTACCATTTGACCATGAGGATGAGCCCTGTACTGGGCCAGGATGTCAGGAGTAGACCAAAAGTAAAATTTAGCTAAATTAAAGCAATAGCCAAGCTAGGCAGGCATATTGAAAAACTATTGGTGACACCGATGTCTCAAATTATAGAACAATTAGGAGTTCATCAGGTATGCACTTCTTGGCACCACCCACCCCACCTCCAGCTCACAACCTGGTCATCCAGTCCAAaccatatacaaaaaaaaaaaaaaaaaaaaaccaaattATGCTCTTTAGAAACTGCAGCTACTATACCAAGCACCTGGAGGGTGGTGGGGGATGGGACGGGGACGGGacgaaaacaaaaatacagagcaAATCTTGAGCACTCGGAGCTGCGTTTGATCAAtgtaaatgaattacaaaaatCATCCCCTACTTAAATGGAATAAACCCCTAAAACAAAGAGGCACAGACAGTCCCGCTGGCTGTTAATCCCTTGATGCAGACCTGGAGCGGGAGCGAGATTTAGAGCGAGAGGGGGAGCGCGAGGCCGAGCGCTTGGACGGAGATTTTGAGTGCCGGCTCTctgcagggggagagggggagcgGGAGACAGATTTGGGCCTCTCGCCCTTCCCGTTCTCTACGGGGGAGGCCGATCGGCTGCGCGACTTCTTGCTCCCGCCTTTTTCCTTGGAGTGGCTGCGGGAATCGCGGTCAGACTTGGCTTTGGAGCGACTCTTGGAGCGGGACTTCCTGGTGTCGGACCTAGACCGAGACTTTCTGCTGGCGGAGCGGCTGCGGGACTTCCGGGTGCGAGACCTGGAACGAGACTTCCTGGTGCGGGATCGAGAGCGGGACTTGCGGACAGGGGACTTGGAGCGGGACTTGCGCCCGGACCTTGAGCGGGATTTGCGTGCAGACCTGGAGCGGGAACGGCGCTTGCTTCTGGAACGAGATCTGCAGAATGAGATTGCAAATGTTATTCCAAATAAGAGCAGCACAATCTGGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36579 True 1424 lncRNA 0.48 2 45539769 45542206

Neighbor

gene id symbol gene type direction distance location
AMCG00008210 NA coding upstream 50803 45488632 ~ 45488966 (+)
AMCG00008198 NA coding upstream 52802 45484630 ~ 45486967 (+)
AMCG00008205 NA coding upstream 71310 45443938 ~ 45468459 (+)
AMCG00008204 NA coding upstream 116342 45416277 ~ 45423427 (+)
AMCG00008200 NA coding upstream 131306 45400869 ~ 45408463 (+)
AMCG00008211 NA coding downstream 56994 45599200 ~ 45638789 (+)
AMCG00008212 myl9,LOC106565219,LOC103045271,LOC101062217,LOC100697131 coding downstream 166362 45708568 ~ 45714043 (+)
AMCG00008218 NA coding downstream 325137 45867343 ~ 45911607 (+)
AMCG00008219 NA coding downstream 497742 46039948 ~ 46068818 (+)
AMCG00008220 NA coding downstream 535101 46077307 ~ 46090993 (+)
G29153 NA non-coding upstream 161416 45378011 ~ 45378353 (+)
G29148 NA non-coding upstream 185690 45353716 ~ 45354079 (+)
G28991 NA non-coding upstream 723106 44768677 ~ 44816663 (+)
G28995 NA non-coding upstream 741306 44795924 ~ 44798463 (+)
G28956 NA non-coding upstream 789861 44691541 ~ 44749908 (+)
G29271 NA non-coding downstream 183777 45725983 ~ 45734261 (+)
G29291 NA non-coding downstream 345743 45887949 ~ 45888412 (+)
G29320 NA non-coding downstream 550702 46092908 ~ 46093489 (+)
G29355 NA non-coding downstream 726469 46268675 ~ 46268989 (+)
G29358 NA non-coding downstream 936286 46478492 ~ 46478774 (+)
G29183 NA other upstream 98705 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 195855 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 367941 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 503353 45023148 ~ 45036416 (+)
AMCG00008132 NA other upstream 2234239 43292596 ~ 43305530 (+)
G29353 NA other downstream 725685 46267891 ~ 46268327 (+)
G29418 NA other downstream 2038007 47580213 ~ 47586235 (+)
G29421 NA other downstream 2052898 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 2080746 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 2122311 47664517 ~ 47716582 (+)

Expression


Co-expression Network