G29294


Basic Information

Item Value
gene id G29294
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45979260 ~ 45979468 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36706
gaggaggaggtactaaagggactagcagaattaaaaacaaacaaatcacctgggccagatggtatatttccaacagtacttaaagaaatgagggaaattatttataggccgctaagtcaaatattccaaatgacacttagaacaggggatgtgccaactgactggaagacggcaaatgtcataccaatccacaagaaaggggacaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36706 True 209 lncRNA 0.41 1 45979260 45979468

Neighbor

gene id symbol gene type direction distance location
AMCG00008216 NA coding downstream 192279 45777462 ~ 45786981 (-)
AMCG00008214 NA coding downstream 218478 45737488 ~ 45760782 (-)
AMCG00008213 NA coding downstream 254833 45717392 ~ 45724427 (-)
AMCG00008215 lpin2 coding downstream 316913 45645248 ~ 45662347 (-)
AMCG00008217 NA coding downstream 337457 45640286 ~ 45641803 (-)
AMCG00008222 NA coding upstream 132468 46111936 ~ 46123767 (-)
AMCG00008223 NA coding upstream 158280 46137748 ~ 46150163 (-)
AMCG00008224 ctnnbl1,LOC106566902 coding upstream 221324 46200792 ~ 46234987 (-)
AMCG00008225 ctnnbl1 coding upstream 255535 46235003 ~ 46238529 (-)
AMCG00008228 NA coding upstream 767725 46747193 ~ 46747558 (-)
G29284 NA non-coding downstream 185309 45793678 ~ 45793951 (-)
G29249 NA non-coding downstream 265223 45599559 ~ 45714037 (-)
G29206 NA non-coding downstream 488370 45490007 ~ 45490890 (-)
G29192 NA non-coding downstream 516730 45461779 ~ 45462530 (-)
G29182 NA non-coding downstream 558798 45419590 ~ 45420462 (-)
G29348 NA non-coding upstream 271195 46250663 ~ 46251181 (-)
G29354 NA non-coding upstream 288425 46267893 ~ 46268278 (-)
G29375 NA non-coding upstream 676766 46656234 ~ 46656566 (-)
G29377 NA non-coding upstream 744165 46723633 ~ 46723895 (-)
G29381 NA non-coding upstream 924324 46903792 ~ 46904222 (-)
AMCG00008192 NA other downstream 750756 45149501 ~ 45228504 (-)
G28970 NA other downstream 1561064 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 2395847 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 2859096 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 3214606 42761004 ~ 42764654 (-)
G29301 NA other upstream 71227 46050695 ~ 46054346 (-)
G29361 NA other upstream 501478 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 1600671 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 1687174 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 2144457 48123925 ~ 48124682 (-)

Expression


Co-expression Network