G29301


Basic Information

Item Value
gene id G29301
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46050695 ~ 46054346 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36715
CTGGTAAACATGCAATGCCCAAATGCAGAAGATGACCGCCGGGTTCCTGTGCTGAGCCAGGCCCCGGTCCACAAGAGCGGGATGCTGGCTGGGTTGCGGTCCTCTCTGCATTAGAGGGCAATGCTTTCTCAGGGCCGTTTGTCTGTTGGGTGGGAGCCTCCGTTTCAGCTCTGCATACCTGGCTAACATCtttttttaatggatttcCATCTGTCCACCTTTGGGGATACCAGTCCGAATACTGTTGTCTTCTTACAGTGTACAACATGGATGGTAGGAATCATTTCTGTACAAACGTCACTGCTCACAATGTCTGCTGTGCTTTGCCCCAAAGAACATTTTCTAGGGGATTCTGAAACAAGGGatggggaaggggaaggggaagaaGGTATCCCCtcattcttgtttgtttgtttcacagagTCTTCCCCAGTACAACAGGGCTTACCTTTCACCTTGCCTGACTCCCTGCATGAAACGGGAGAATCGTTGCTGACAACCTGACACTGAGGTTCTGTTTGGTAGGCCTGGCCAGATTCTGTACTGTCATAGACGGAGCCTGACCCTCTCCTGGCAGGGGCCGACTCCTCCGAAATGGGTGCCATGTCCCCTCTTTCAAAGTTTACGGGATTCTGGAGGGCTGCCATGTAGGACTCCCGATACCTGCACCGTAGCTCCTGGAGTTTGGACTCATGCCCCAGCTTCCTCCTCAGACACGGGGTGCAGGGCTCCTCGGAGAACTGGGCAGTCCGACCACAGGGCGTGGGGTCCCCGCTGGCTGGGGGCAGAGGCCTGGATGCCTCAAAGGAAGGGGGGTCCTTTGTAGTCCGTGGAGGTAACCTGCTGAGGGCCAGAGCAGCCCTCTCCTTGGTGAACTCCACCAGGTCCACATAATCCCCTTCCAGCTCTCGGTTGCGGCTGTCCCAGGTGTTGGGTGACACCCAGCCAATGGGTTTGCCAGCCACCTTGGGCTGGTCCACCTTGATAAGCCTGGTGCAGGTGCCATCGACGAGCCTGAGGGAGACTGCAATGCCGTCCTTGGCGGGGAGAATCCTGGTCTCCACGGAGAAGGGAGATGGGTTAGAGGAAGGGGGCGGCGCAGTTGGGGGAACCTCAGGGGTTACCAGAGAGCTGGCCATGGCTTTAGGTTTGTCCACAAACTCTGGACTGGCCACTTGTGCCCACGGTACCTTCACGATGCCCTGATCCGTGGACAGCAGGCATGTGTGCAGCGGGGTGCCATGGCGTCCCTGGTTGATCTCCTCCAGCCAGTCTTTGGTGAATATGCTGGGGTAAGAGGTCTCGGGGACAGGGGTCTCCTCCACCTCCCGGTGATCCTCCAGCAGGCTCTTGAGCACGATACGGGCTGCCTGTTCCCCAAAGGGCTGCACCTGCAGGTAGAAATCTCCTGGGCGCAAAAGCAAGGGGTTGAGGGACGCCAGCTGGATcaccaccctctctctcaggcagaGTGGCCAACCCTCAAAGCGGAAGAGCACGTCAGAGTACACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36715 True 1514 TUCP 0.57 2 46050695 46054346

Neighbor

gene id symbol gene type direction distance location
AMCG00008216 NA coding downstream 263714 45777462 ~ 45786981 (-)
AMCG00008214 NA coding downstream 289913 45737488 ~ 45760782 (-)
AMCG00008213 NA coding downstream 326268 45717392 ~ 45724427 (-)
AMCG00008215 lpin2 coding downstream 388348 45645248 ~ 45662347 (-)
AMCG00008217 NA coding downstream 408892 45640286 ~ 45641803 (-)
AMCG00008222 NA coding upstream 57590 46111936 ~ 46123767 (-)
AMCG00008223 NA coding upstream 83402 46137748 ~ 46150163 (-)
AMCG00008224 ctnnbl1,LOC106566902 coding upstream 146446 46200792 ~ 46234987 (-)
AMCG00008225 ctnnbl1 coding upstream 180657 46235003 ~ 46238529 (-)
AMCG00008228 NA coding upstream 692847 46747193 ~ 46747558 (-)
G29294 NA non-coding downstream 71227 45979260 ~ 45979468 (-)
G29284 NA non-coding downstream 256744 45793678 ~ 45793951 (-)
G29249 NA non-coding downstream 336658 45599559 ~ 45714037 (-)
G29206 NA non-coding downstream 559805 45490007 ~ 45490890 (-)
G29192 NA non-coding downstream 588165 45461779 ~ 45462530 (-)
G29348 NA non-coding upstream 196317 46250663 ~ 46251181 (-)
G29354 NA non-coding upstream 213547 46267893 ~ 46268278 (-)
G29375 NA non-coding upstream 601888 46656234 ~ 46656566 (-)
G29377 NA non-coding upstream 669287 46723633 ~ 46723895 (-)
G29381 NA non-coding upstream 849446 46903792 ~ 46904222 (-)
AMCG00008192 NA other downstream 822191 45149501 ~ 45228504 (-)
G28970 NA other downstream 1632499 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 2467282 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 2930531 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 3286041 42761004 ~ 42764654 (-)
G29361 NA other upstream 426600 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 1525793 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 1612296 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 2069579 48123925 ~ 48124682 (-)
AMCG00008256 arfgef2 other upstream 2148275 48202621 ~ 48291443 (-)

Expression


Co-expression Network