G29348


Basic Information

Item Value
gene id G29348
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46250663 ~ 46251181 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36772
NNNccggttctggcaacagagctacaggttgagctgtggctgcgagttactggttcaggtgagagatagagagagactgactgtccgctgttccttatagtctgtcagatcaataggtgattggttcctgagttcttgagattggatttcggtttcagcccccagtgtcctattggaggggggcttgatttatgactgatgtcaatccatgccatattttggaaatgccggttggcccgggttcgtagctctatgtcgggatttcggctctcatccacttcaaagagtttttatcacctacaggcccctttctccagacatctcatagcagaattccaaactatttggcctcttcttggtgccatcctccccaaaactgtcactttgatgcaaatcagttccaagctgatgagctaagggaatctgataactttgggggggagaggttttctttagatcagtgcttcagctcagagcccaaatgctcttatccaaatacacccaacataatgctacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36772 True 519 lncRNA 0.47 1 46250663 46251181

Neighbor

gene id symbol gene type direction distance location
AMCG00008225 ctnnbl1 coding downstream 12134 46235003 ~ 46238529 (-)
AMCG00008224 ctnnbl1,LOC106566902 coding downstream 15676 46200792 ~ 46234987 (-)
AMCG00008223 NA coding downstream 100500 46137748 ~ 46150163 (-)
AMCG00008222 NA coding downstream 126896 46111936 ~ 46123767 (-)
AMCG00008216 NA coding downstream 463682 45777462 ~ 45786981 (-)
AMCG00008228 NA coding upstream 496012 46747193 ~ 46747558 (-)
AMCG00008229 cdh22,LOC106565306,LOC107553911 coding upstream 706684 46957865 ~ 46964572 (-)
AMCG00008230 cdh22 coding upstream 730155 46981336 ~ 47013277 (-)
AMCG00008227 cdh22,LOC107681302,LOC107666158 coding upstream 795541 47046722 ~ 47068199 (-)
AMCG00008231 LOC107681302,LOC107587604 coding upstream 841110 47092291 ~ 47117500 (-)
G29294 NA non-coding downstream 271195 45979260 ~ 45979468 (-)
G29284 NA non-coding downstream 456712 45793678 ~ 45793951 (-)
G29249 NA non-coding downstream 536626 45599559 ~ 45714037 (-)
G29206 NA non-coding downstream 759773 45490007 ~ 45490890 (-)
G29192 NA non-coding downstream 788133 45461779 ~ 45462530 (-)
G29354 NA non-coding upstream 16712 46267893 ~ 46268278 (-)
G29375 NA non-coding upstream 405053 46656234 ~ 46656566 (-)
G29377 NA non-coding upstream 472452 46723633 ~ 46723895 (-)
G29381 NA non-coding upstream 652611 46903792 ~ 46904222 (-)
G29383 NA non-coding upstream 680178 46931359 ~ 46934268 (-)
G29301 NA other downstream 196317 46050695 ~ 46054346 (-)
AMCG00008192 NA other downstream 1022159 45149501 ~ 45228504 (-)
G28970 NA other downstream 1832467 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 2667250 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 3130499 43097111 ~ 43120164 (-)
G29361 NA other upstream 229765 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 1328958 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 1415461 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 1872744 48123925 ~ 48124682 (-)
AMCG00008256 arfgef2 other upstream 1951440 48202621 ~ 48291443 (-)

Expression


Co-expression Network