G29353


Basic Information

Item Value
gene id G29353
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46267891 ~ 46268327 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36777
ttctacgctgatgatgcccagatcttcctgtcttttccctcttctgaccctctcatcccctcacgcatctcttcctgcttgtctgccatttccgcctggatgcactcgcaccacctcaagctcaacctctccaaatcagatctcctctttttcccccactcttcctcaccttctgctgacctccccatctcgatccccttggaatccaccacactctctccttcttcttccgctaaaaatctaggagtcaccctcgatcctgcgctctcctactcccagcacatcaccacgctgatgcgcacctgcagattcttcctgagcaacatacaccggaTCCATCCCtttctcaccgactactcaactcagctactcgtccagtcactggtcctctcccgcctggactactgcaactccctcctggctggcctgcctgcatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36777 True 437 TUCP 0.55 1 46267891 46268327

Neighbor

gene id symbol gene type direction distance location
AMCG00008221 LOC102785565 coding upstream 136874 46124130 ~ 46131017 (+)
AMCG00008220 NA coding upstream 176898 46077307 ~ 46090993 (+)
AMCG00008219 NA coding upstream 199073 46039948 ~ 46068818 (+)
AMCG00008218 NA coding upstream 356284 45867343 ~ 45911607 (+)
AMCG00008212 myl9,LOC106565219,LOC103045271,LOC101062217,LOC100697131 coding upstream 553848 45708568 ~ 45714043 (+)
AMCG00008226 NA coding downstream 262123 46530450 ~ 46530758 (+)
AMCG00008239 NA coding downstream 1532771 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 1627591 47895918 ~ 47908312 (+)
AMCG00008248 NA coding downstream 1686707 47955034 ~ 48001940 (+)
AMCG00008247 LOC107565828 coding downstream 1746773 48015100 ~ 48030729 (+)
G29320 NA non-coding upstream 174402 46092908 ~ 46093489 (+)
G29291 NA non-coding upstream 379479 45887949 ~ 45888412 (+)
G29271 NA non-coding upstream 533630 45725983 ~ 45734261 (+)
G29223 NA non-coding upstream 725685 45539769 ~ 45542206 (+)
G29153 NA non-coding upstream 889538 45378011 ~ 45378353 (+)
G29355 NA non-coding downstream 348 46268675 ~ 46268989 (+)
G29358 NA non-coding downstream 210165 46478492 ~ 46478774 (+)
G29368 NA non-coding downstream 242057 46510384 ~ 46531909 (+)
G29372 NA non-coding downstream 266640 46534967 ~ 46535184 (+)
G29376 NA non-coding downstream 455306 46723633 ~ 46723895 (+)
G29183 NA other upstream 826827 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 923977 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 1096063 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 1231475 45023148 ~ 45036416 (+)
AMCG00008132 NA other upstream 2962361 43292596 ~ 43305530 (+)
G29418 NA other downstream 1311886 47580213 ~ 47586235 (+)
G29421 NA other downstream 1326777 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 1354625 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 1396190 47664517 ~ 47716582 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other downstream 1595242 47863569 ~ 47892071 (+)

Expression


Co-expression Network