G29358


Basic Information

Item Value
gene id G29358
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46478492 ~ 46478774 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36782
aaaaaaacataacaaccaaaaaacccaaacaactagtgcttttaaaatcaactaaatctttaaaaacagttaaaattcattttttaaaagtcattttttaaaaacaatcttttcataaaaatggttaaaagatcttggactcgggctccagcagggggagatggccgtccccggagatgggtcccatcacgggatcctgagctcccccagatcttgtatttgccagttcttaaaggcttcctccttgcccctctgatggacctccagattgacatagtcccta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36782 True 283 lncRNA 0.40 1 46478492 46478774

Neighbor

gene id symbol gene type direction distance location
AMCG00008221 LOC102785565 coding upstream 347475 46124130 ~ 46131017 (+)
AMCG00008220 NA coding upstream 387499 46077307 ~ 46090993 (+)
AMCG00008219 NA coding upstream 409674 46039948 ~ 46068818 (+)
AMCG00008218 NA coding upstream 566885 45867343 ~ 45911607 (+)
AMCG00008212 myl9,LOC106565219,LOC103045271,LOC101062217,LOC100697131 coding upstream 764449 45708568 ~ 45714043 (+)
AMCG00008226 NA coding downstream 51676 46530450 ~ 46530758 (+)
AMCG00008239 NA coding downstream 1322324 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 1417144 47895918 ~ 47908312 (+)
AMCG00008248 NA coding downstream 1476260 47955034 ~ 48001940 (+)
AMCG00008247 LOC107565828 coding downstream 1536326 48015100 ~ 48030729 (+)
G29355 NA non-coding upstream 209503 46268675 ~ 46268989 (+)
G29320 NA non-coding upstream 385003 46092908 ~ 46093489 (+)
G29291 NA non-coding upstream 590080 45887949 ~ 45888412 (+)
G29271 NA non-coding upstream 744231 45725983 ~ 45734261 (+)
G29223 NA non-coding upstream 936286 45539769 ~ 45542206 (+)
G29368 NA non-coding downstream 31610 46510384 ~ 46531909 (+)
G29372 NA non-coding downstream 56193 46534967 ~ 46535184 (+)
G29376 NA non-coding downstream 244859 46723633 ~ 46723895 (+)
G29387 LOC107575789,LOC100846954 non-coding downstream 559690 47038464 ~ 47038892 (+)
G29404 NA non-coding downstream 933585 47412359 ~ 47412566 (+)
G29353 NA other upstream 210165 46267891 ~ 46268327 (+)
G29183 NA other upstream 1037428 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 1134578 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 1306664 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 1442076 45023148 ~ 45036416 (+)
G29418 NA other downstream 1101439 47580213 ~ 47586235 (+)
G29421 NA other downstream 1116330 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 1144178 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 1185743 47664517 ~ 47716582 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other downstream 1384795 47863569 ~ 47892071 (+)

Expression


Co-expression Network