G29368


Basic Information

Item Value
gene id G29368
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46510384 ~ 46531909 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36795
tgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttggtggtggtgtaatggtgtgggggatgttttcttggcacactttaggccccttagtACCAATTGGGCATCGTTTAAAAGCTacggcctacctgagcattgtttctgaccatgtccatccctttatgaccaccatgtacccatcctctgatggctacttccagcaggataatgcaccatgtcacaaaggtcgaatcatttcaatttgttcactgtactaaactagcacccacagtcaccagatctcaacccaatagagcatgtttgggatgtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaaggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatcagtctcatttacgtttgggtgccgagaaagattctatcatttcttgtaaccacaattctccctaattgattactgttcaatgattaaggataggcagggccacctataatctggtgtctattaacgtgtgtcaatttcagactaaacagttaaacaggaatgagaagatatttctcggcgttgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36795 True 802 lncRNA 0.43 4 46510384 46531909

Neighbor

gene id symbol gene type direction distance location
AMCG00008221 LOC102785565 coding upstream 379367 46124130 ~ 46131017 (+)
AMCG00008220 NA coding upstream 419391 46077307 ~ 46090993 (+)
AMCG00008219 NA coding upstream 441566 46039948 ~ 46068818 (+)
AMCG00008218 NA coding upstream 598777 45867343 ~ 45911607 (+)
AMCG00008212 myl9,LOC106565219,LOC103045271,LOC101062217,LOC100697131 coding upstream 796341 45708568 ~ 45714043 (+)
AMCG00008239 NA coding downstream 1269189 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 1364009 47895918 ~ 47908312 (+)
AMCG00008248 NA coding downstream 1423125 47955034 ~ 48001940 (+)
AMCG00008247 LOC107565828 coding downstream 1483191 48015100 ~ 48030729 (+)
AMCG00008246 NA coding downstream 1510837 48042746 ~ 48067543 (+)
G29358 NA non-coding upstream 31610 46478492 ~ 46478774 (+)
G29355 NA non-coding upstream 241395 46268675 ~ 46268989 (+)
G29320 NA non-coding upstream 416895 46092908 ~ 46093489 (+)
G29291 NA non-coding upstream 621972 45887949 ~ 45888412 (+)
G29271 NA non-coding upstream 776123 45725983 ~ 45734261 (+)
G29372 NA non-coding downstream 3058 46534967 ~ 46535184 (+)
G29376 NA non-coding downstream 191724 46723633 ~ 46723895 (+)
G29387 LOC107575789,LOC100846954 non-coding downstream 506555 47038464 ~ 47038892 (+)
G29404 NA non-coding downstream 880450 47412359 ~ 47412566 (+)
G29412 NA non-coding downstream 1033432 47565341 ~ 47565553 (+)
G29353 NA other upstream 242057 46267891 ~ 46268327 (+)
G29183 NA other upstream 1069320 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 1166470 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 1338556 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 1473968 45023148 ~ 45036416 (+)
G29418 NA other downstream 1048304 47580213 ~ 47586235 (+)
G29421 NA other downstream 1063195 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 1091043 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 1132608 47664517 ~ 47716582 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other downstream 1331660 47863569 ~ 47892071 (+)

Expression


Co-expression Network