G29372


Basic Information

Item Value
gene id G29372
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46534967 ~ 46535184 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36800
aatccctcctgagatgtgtgcaaacctggtggccaactacaagaaatgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36800 True 218 lncRNA 0.38 1 46534967 46535184

Neighbor

gene id symbol gene type direction distance location
AMCG00008226 NA coding upstream 4209 46530450 ~ 46530758 (+)
AMCG00008221 LOC102785565 coding upstream 403950 46124130 ~ 46131017 (+)
AMCG00008220 NA coding upstream 443974 46077307 ~ 46090993 (+)
AMCG00008219 NA coding upstream 466149 46039948 ~ 46068818 (+)
AMCG00008218 NA coding upstream 623360 45867343 ~ 45911607 (+)
AMCG00008239 NA coding downstream 1265914 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 1360734 47895918 ~ 47908312 (+)
AMCG00008248 NA coding downstream 1419850 47955034 ~ 48001940 (+)
AMCG00008247 LOC107565828 coding downstream 1479916 48015100 ~ 48030729 (+)
AMCG00008246 NA coding downstream 1507562 48042746 ~ 48067543 (+)
G29368 NA non-coding upstream 3058 46510384 ~ 46531909 (+)
G29358 NA non-coding upstream 56193 46478492 ~ 46478774 (+)
G29355 NA non-coding upstream 265978 46268675 ~ 46268989 (+)
G29320 NA non-coding upstream 441478 46092908 ~ 46093489 (+)
G29291 NA non-coding upstream 646555 45887949 ~ 45888412 (+)
G29376 NA non-coding downstream 188449 46723633 ~ 46723895 (+)
G29387 LOC107575789,LOC100846954 non-coding downstream 503280 47038464 ~ 47038892 (+)
G29404 NA non-coding downstream 877175 47412359 ~ 47412566 (+)
G29412 NA non-coding downstream 1030157 47565341 ~ 47565553 (+)
G29417 NA non-coding downstream 1042492 47577676 ~ 47578641 (+)
G29353 NA other upstream 266640 46267891 ~ 46268327 (+)
G29183 NA other upstream 1093903 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 1191053 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 1363139 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 1498551 45023148 ~ 45036416 (+)
G29418 NA other downstream 1045029 47580213 ~ 47586235 (+)
G29421 NA other downstream 1059920 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 1087768 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 1129333 47664517 ~ 47716582 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other downstream 1328385 47863569 ~ 47892071 (+)

Expression


Co-expression Network