Gene
RNA
| Item | Value |
|---|---|
| gene id | G29377 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 46723633 ~ 46723895 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36805 | True | 263 | lncRNA | 0.60 | 1 | 46723633 | 46723895 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008225 | ctnnbl1 | coding | downstream | 485104 | 46235003 ~ 46238529 (-) |
| AMCG00008224 | ctnnbl1,LOC106566902 | coding | downstream | 488646 | 46200792 ~ 46234987 (-) |
| AMCG00008223 | NA | coding | downstream | 573470 | 46137748 ~ 46150163 (-) |
| AMCG00008222 | NA | coding | downstream | 599866 | 46111936 ~ 46123767 (-) |
| AMCG00008216 | NA | coding | downstream | 936652 | 45777462 ~ 45786981 (-) |
| AMCG00008228 | NA | coding | upstream | 23298 | 46747193 ~ 46747558 (-) |
| AMCG00008229 | cdh22,LOC106565306,LOC107553911 | coding | upstream | 233970 | 46957865 ~ 46964572 (-) |
| AMCG00008230 | cdh22 | coding | upstream | 257441 | 46981336 ~ 47013277 (-) |
| AMCG00008227 | cdh22,LOC107681302,LOC107666158 | coding | upstream | 322827 | 47046722 ~ 47068199 (-) |
| AMCG00008231 | LOC107681302,LOC107587604 | coding | upstream | 368396 | 47092291 ~ 47117500 (-) |
| G29375 | NA | non-coding | downstream | 67067 | 46656234 ~ 46656566 (-) |
| G29354 | NA | non-coding | downstream | 455355 | 46267893 ~ 46268278 (-) |
| G29348 | NA | non-coding | downstream | 472452 | 46250663 ~ 46251181 (-) |
| G29294 | NA | non-coding | downstream | 744165 | 45979260 ~ 45979468 (-) |
| G29284 | NA | non-coding | downstream | 929682 | 45793678 ~ 45793951 (-) |
| G29381 | NA | non-coding | upstream | 179897 | 46903792 ~ 46904222 (-) |
| G29383 | NA | non-coding | upstream | 207464 | 46931359 ~ 46934268 (-) |
| G29397 | NA | non-coding | upstream | 394742 | 47118637 ~ 47121378 (-) |
| G29403 | NA | non-coding | upstream | 685892 | 47409787 ~ 47410050 (-) |
| G29410 | NA | non-coding | upstream | 806537 | 47530432 ~ 47530659 (-) |
| G29361 | NA | other | downstream | 241735 | 46480946 ~ 46481898 (-) |
| G29301 | NA | other | downstream | 669287 | 46050695 ~ 46054346 (-) |
| AMCG00008192 | NA | other | downstream | 1495129 | 45149501 ~ 45228504 (-) |
| G28970 | NA | other | downstream | 2305437 | 44417874 ~ 44418196 (-) |
| AMCG00008144 | phf20,LOC107727854 | other | downstream | 3140220 | 43510760 ~ 43583413 (-) |
| AMCG00008233 | NA | other | upstream | 856244 | 47580139 ~ 47607012 (-) |
| AMCG00008245 | si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 | other | upstream | 942747 | 47666642 ~ 47918462 (-) |
| G29544 | LOC100846954 | other | upstream | 1400030 | 48123925 ~ 48124682 (-) |
| AMCG00008256 | arfgef2 | other | upstream | 1478726 | 48202621 ~ 48291443 (-) |
| AMCG00008255 | NA | other | upstream | 1687190 | 48411085 ~ 48418933 (-) |
