G29381


Basic Information

Item Value
gene id G29381
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46903792 ~ 46904222 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36809
ataacgagaagttacctgacattaaatactaacctgcgtagttatttaatgtctactaataatactaacgAGAGATTCACCTTcatcttactaaccggtattgtagtcaatgtgtttataaccttttttgtttaacgatttgtgttatcatatgcgatcccatggtctttgatttggtcatggaagtgatttgtctttgatttgttgatctagagttgaattttaattagtttttcccttttgtataattagtgtagtgctacatttagtctttgttttgaatacatttgacaatttatatctttggaattggtgtctgtgtccaattattacagaaattgagttctacaagattccaggattcgtgataaggtgatactataaattcacttctttaattgaaatttataagtgtaccttacgctacaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36809 True 431 lncRNA 0.31 1 46903792 46904222

Neighbor

gene id symbol gene type direction distance location
AMCG00008228 NA coding downstream 156234 46747193 ~ 46747558 (-)
AMCG00008225 ctnnbl1 coding downstream 665263 46235003 ~ 46238529 (-)
AMCG00008224 ctnnbl1,LOC106566902 coding downstream 668805 46200792 ~ 46234987 (-)
AMCG00008223 NA coding downstream 753629 46137748 ~ 46150163 (-)
AMCG00008222 NA coding downstream 780025 46111936 ~ 46123767 (-)
AMCG00008229 cdh22,LOC106565306,LOC107553911 coding upstream 53643 46957865 ~ 46964572 (-)
AMCG00008230 cdh22 coding upstream 77114 46981336 ~ 47013277 (-)
AMCG00008227 cdh22,LOC107681302,LOC107666158 coding upstream 142500 47046722 ~ 47068199 (-)
AMCG00008231 LOC107681302,LOC107587604 coding upstream 188069 47092291 ~ 47117500 (-)
AMCG00008234 ddx27,LOC107553908,LOC107681294,LOC107587605,LOC107744345 coding upstream 711631 47615853 ~ 47619787 (-)
G29377 NA non-coding downstream 179897 46723633 ~ 46723895 (-)
G29375 NA non-coding downstream 247226 46656234 ~ 46656566 (-)
G29354 NA non-coding downstream 635514 46267893 ~ 46268278 (-)
G29348 NA non-coding downstream 652611 46250663 ~ 46251181 (-)
G29294 NA non-coding downstream 924324 45979260 ~ 45979468 (-)
G29383 NA non-coding upstream 27137 46931359 ~ 46934268 (-)
G29397 NA non-coding upstream 214415 47118637 ~ 47121378 (-)
G29403 NA non-coding upstream 505565 47409787 ~ 47410050 (-)
G29410 NA non-coding upstream 626210 47530432 ~ 47530659 (-)
G29521 NA non-coding upstream 1104435 48008657 ~ 48012955 (-)
G29361 NA other downstream 421894 46480946 ~ 46481898 (-)
G29301 NA other downstream 849446 46050695 ~ 46054346 (-)
AMCG00008192 NA other downstream 1675288 45149501 ~ 45228504 (-)
G28970 NA other downstream 2485596 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 3320379 43510760 ~ 43583413 (-)
AMCG00008233 NA other upstream 675917 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 762420 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 1219703 48123925 ~ 48124682 (-)
AMCG00008256 arfgef2 other upstream 1298399 48202621 ~ 48291443 (-)
AMCG00008255 NA other upstream 1506863 48411085 ~ 48418933 (-)

Expression


Co-expression Network