G29404


Basic Information

Item Value
gene id G29404
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 47412359 ~ 47412566 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36833
CAGAGTCTGTGTatgggtttcaggatgtgtctgAAATTTCACAAATACTTCCTTTACCTCACAACGGTACCACACtacaatttttaaagacaacaacTCCTCAAACTTGGTAATGTCTGAAAAGGCCACCATCTGTTGAGAGTTTAAGCCGGCACTCTGATGAAGCATTAAAGCTTCTTGCAGAGCTTGGGGTTCAGGCATGTCGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36833 True 208 lncRNA 0.44 1 47412359 47412566

Neighbor

gene id symbol gene type direction distance location
AMCG00008226 NA coding upstream 881601 46530450 ~ 46530758 (+)
AMCG00008221 LOC102785565 coding upstream 1281342 46124130 ~ 46131017 (+)
AMCG00008220 NA coding upstream 1321366 46077307 ~ 46090993 (+)
AMCG00008219 NA coding upstream 1343541 46039948 ~ 46068818 (+)
AMCG00008218 NA coding upstream 1500752 45867343 ~ 45911607 (+)
AMCG00008239 NA coding downstream 388532 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 483352 47895918 ~ 47908312 (+)
AMCG00008248 NA coding downstream 542468 47955034 ~ 48001940 (+)
AMCG00008247 LOC107565828 coding downstream 602534 48015100 ~ 48030729 (+)
AMCG00008246 NA coding downstream 630180 48042746 ~ 48067543 (+)
G29387 LOC107575789,LOC100846954 non-coding upstream 373467 47038464 ~ 47038892 (+)
G29376 NA non-coding upstream 688464 46723633 ~ 46723895 (+)
G29372 NA non-coding upstream 877175 46534967 ~ 46535184 (+)
G29368 NA non-coding upstream 880450 46510384 ~ 46531909 (+)
G29358 NA non-coding upstream 933585 46478492 ~ 46478774 (+)
G29412 NA non-coding downstream 152775 47565341 ~ 47565553 (+)
G29417 NA non-coding downstream 165110 47577676 ~ 47578641 (+)
G29419 znfx1,LOC106583673,LOC107587633,LOC107744348 non-coding downstream 176947 47589513 ~ 47589814 (+)
G29422 NA non-coding downstream 186668 47599234 ~ 47599468 (+)
G29423 NA non-coding downstream 188254 47600820 ~ 47601101 (+)
G29353 NA other upstream 1144032 46267891 ~ 46268327 (+)
G29183 NA other upstream 1971295 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 2068445 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 2240531 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 2375943 45023148 ~ 45036416 (+)
G29418 NA other downstream 167647 47580213 ~ 47586235 (+)
G29421 NA other downstream 182538 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 210386 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 251951 47664517 ~ 47716582 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other downstream 451003 47863569 ~ 47892071 (+)

Expression


Co-expression Network