G29412


Basic Information

Item Value
gene id G29412
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 47565341 ~ 47565553 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36841
CTCAGACAATACATGAAGTGGAACCATTCTGGCACAAGGCAAGGATACCAATAAGACCTCGTCATCATGCTATTGAACAGTTGGAACAGTTAATTTCCAGGTGGGAAAggcttaagaaaaacaaaggacGTCGAACTAAAACACAGATATCAAACGAAGAAAGCTTAACCGATACATTCTCCGATTTATTTGACATTGCTCACCAGGATGCGT

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU36841 True 213 lncRNA 0.41 1 47565341 47565553

Neighbor

gene id symbol gene type direction distance location
AMCG00008226 NA coding upstream 1034583 46530450 ~ 46530758 (+)
AMCG00008221 LOC102785565 coding upstream 1434324 46124130 ~ 46131017 (+)
AMCG00008220 NA coding upstream 1474348 46077307 ~ 46090993 (+)
AMCG00008219 NA coding upstream 1496523 46039948 ~ 46068818 (+)
AMCG00008218 NA coding upstream 1653734 45867343 ~ 45911607 (+)
AMCG00008239 NA coding downstream 235545 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 330365 47895918 ~ 47908312 (+)
AMCG00008248 NA coding downstream 389481 47955034 ~ 48001940 (+)
AMCG00008247 LOC107565828 coding downstream 449547 48015100 ~ 48030729 (+)
AMCG00008246 NA coding downstream 477193 48042746 ~ 48067543 (+)
G29404 NA non-coding upstream 152775 47412359 ~ 47412566 (+)
G29387 LOC107575789,LOC100846954 non-coding upstream 526449 47038464 ~ 47038892 (+)
G29376 NA non-coding upstream 841446 46723633 ~ 46723895 (+)
G29372 NA non-coding upstream 1030157 46534967 ~ 46535184 (+)
G29368 NA non-coding upstream 1033432 46510384 ~ 46531909 (+)
G29417 NA non-coding downstream 12123 47577676 ~ 47578641 (+)
G29419 znfx1,LOC106583673,LOC107587633,LOC107744348 non-coding downstream 23960 47589513 ~ 47589814 (+)
G29422 NA non-coding downstream 33681 47599234 ~ 47599468 (+)
G29423 NA non-coding downstream 35267 47600820 ~ 47601101 (+)
G29424 NA non-coding downstream 36665 47602218 ~ 47602686 (+)
G29353 NA other upstream 1297014 46267891 ~ 46268327 (+)
G29183 NA other upstream 2124277 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 2221427 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 2393513 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 2528925 45023148 ~ 45036416 (+)
G29418 NA other downstream 14660 47580213 ~ 47586235 (+)
G29421 NA other downstream 29551 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 57399 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 98964 47664517 ~ 47716582 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other downstream 298016 47863569 ~ 47892071 (+)

Expression


Co-expression Network