G29422


Basic Information

Item Value
gene id G29422
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 47599234 ~ 47599468 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU36852
CTCGAAGTAGGCCCggcggaggtgggggggcaggctgCGGCGAAAGTTCGGGCCCCCCCTCAGCTCCCTCAGGGTGAACCGCTTCAGGATTTCGCTGTTGCTGCGACCACCCACCCTCACTATCCCGGAGTCCAGGAAGGTGTGGATCCCTGTGGAAAAAAGACTGAATGAAATATAAGCCTCCCAGATGGTGTGTGTAGTTAAGGGGGGACAGGAATGACAGGGTTAAATTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36852 True 235 lncRNA 0.57 1 47599234 47599468

Neighbor

gene id symbol gene type direction distance location
AMCG00008226 NA coding upstream 1068476 46530450 ~ 46530758 (+)
AMCG00008221 LOC102785565 coding upstream 1468217 46124130 ~ 46131017 (+)
AMCG00008220 NA coding upstream 1508241 46077307 ~ 46090993 (+)
AMCG00008219 NA coding upstream 1530416 46039948 ~ 46068818 (+)
AMCG00008218 NA coding upstream 1687627 45867343 ~ 45911607 (+)
AMCG00008239 NA coding downstream 201630 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 296450 47895918 ~ 47908312 (+)
AMCG00008248 NA coding downstream 355566 47955034 ~ 48001940 (+)
AMCG00008247 LOC107565828 coding downstream 415632 48015100 ~ 48030729 (+)
AMCG00008246 NA coding downstream 443278 48042746 ~ 48067543 (+)
G29419 znfx1,LOC106583673,LOC107587633,LOC107744348 non-coding upstream 9420 47589513 ~ 47589814 (+)
G29417 NA non-coding upstream 20593 47577676 ~ 47578641 (+)
G29412 NA non-coding upstream 33681 47565341 ~ 47565553 (+)
G29404 NA non-coding upstream 186668 47412359 ~ 47412566 (+)
G29387 LOC107575789,LOC100846954 non-coding upstream 560342 47038464 ~ 47038892 (+)
G29423 NA non-coding downstream 1352 47600820 ~ 47601101 (+)
G29424 NA non-coding downstream 2750 47602218 ~ 47602686 (+)
G29425 NA non-coding downstream 5672 47605140 ~ 47606425 (+)
G29431 NA non-coding downstream 14033 47613501 ~ 47615931 (+)
G29546 NA non-coding downstream 537001 48136469 ~ 48136724 (+)
G29421 NA other upstream 3548 47595104 ~ 47595686 (+)
G29418 NA other upstream 12999 47580213 ~ 47586235 (+)
G29353 NA other upstream 1330907 46267891 ~ 46268327 (+)
G29183 NA other upstream 2158170 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 2255320 45340574 ~ 45343914 (+)
AMCG00008232 ddx27 other downstream 23484 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 65049 47664517 ~ 47716582 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other downstream 264101 47863569 ~ 47892071 (+)
AMCG00008241 LOC106596195,LOC106601018,LOC105896344,LOC105896343 other downstream 314400 47913868 ~ 47918128 (+)
AMCG00008249 NA other downstream 330199 47929667 ~ 47941754 (+)

Expression


Co-expression Network