G29692


Basic Information

Item Value
gene id G29692
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 48820475 ~ 48820694 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37163
attttttcttACCCTCTATCTCCACaaccatatatatgtgtgttgaGGCTCAGTTAACTCTGCAGTGTGGTACAGATGACACTGAGGAGTTGCCTTATCTGGGCCAGCTGGGCGGCATCGGGCCTCCAGGCTCTGGAAGCCGCTGCTGCGTAGCTGTGTGGCTGTGCTGGTCCCCGGCTGTCCGCTCTGCTGTGCTGGATGGGCCCTCTGGGGATGGGGG

Function

GO: NA

KEGG:

id description
ko00910 Nitrogen metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU37163 True 220 lncRNA 0.58 1 48820475 48820694

Neighbor

gene id symbol gene type direction distance location
AMCG00008250 NA coding upstream 345943 48462293 ~ 48474532 (+)
AMCG00008253 stau1 coding upstream 444404 48347747 ~ 48376071 (+)
AMCG00008252 cse1l coding upstream 494337 48292639 ~ 48326138 (+)
AMCG00008251 arfgef2,LOC106532188 coding upstream 545127 48235687 ~ 48275348 (+)
AMCG00008246 NA coding upstream 752932 48042746 ~ 48067543 (+)
AMCG00008262 stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842 coding downstream 103170 48923864 ~ 48940095 (+)
AMCG00008272 NA coding downstream 648595 49469289 ~ 49471615 (+)
AMCG00008280 jph2,LOC107707015,LOC108275945 coding downstream 729212 49549906 ~ 49560080 (+)
AMCG00008281 NA coding downstream 766373 49587067 ~ 49596793 (+)
AMCG00008283 NA coding downstream 1059285 49879979 ~ 49881352 (+)
G29677 NA non-coding upstream 16570 48762685 ~ 48803905 (+)
G29675 NA non-coding upstream 58178 48761972 ~ 48762297 (+)
G29661 NA non-coding upstream 144336 48674248 ~ 48676139 (+)
G29615 NA non-coding upstream 391257 48428975 ~ 48429218 (+)
G29612 NA non-coding upstream 401412 48415003 ~ 48419063 (+)
G29722 NA non-coding downstream 146262 48966956 ~ 48967220 (+)
G29742 NA non-coding downstream 284519 49105213 ~ 49105444 (+)
G29747 NA non-coding downstream 316822 49137516 ~ 49192216 (+)
G29748 NA non-coding downstream 318446 49139140 ~ 49147225 (+)
G29813 NA non-coding downstream 523344 49344038 ~ 49348022 (+)
AMCG00008249 NA other upstream 878721 47929667 ~ 47941754 (+)
AMCG00008241 LOC106596195,LOC106601018,LOC105896344,LOC105896343 other upstream 902347 47913868 ~ 47918128 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other upstream 928404 47863569 ~ 47892071 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other upstream 1103893 47664517 ~ 47716582 (+)
AMCG00008232 ddx27 other upstream 1149054 47622952 ~ 47671421 (+)
AMCG00008263 NA other downstream 343122 49163816 ~ 49171017 (+)
AMCG00008270 ttpal other downstream 467552 49288246 ~ 49295359 (+)
AMCG00008271 NA other downstream 584162 49404856 ~ 49418746 (+)
AMCG00008279 NA other downstream 1018818 49839512 ~ 49858576 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other downstream 1502019 50322713 ~ 50356404 (+)

Expression


Co-expression Network