G29742


Basic Information

Item Value
gene id G29742
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49105213 ~ 49105444 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37222
tgtcagtgactttacttcccgggcctgtctcctgttgaaaagcctcatctgttactggaagcgctcactggggtgcctgattcactgggacccgaagggttgcttcaactgaagcattgtaccttaacaaaTGGGGGCTCGTCCGGGATACAATCAGgtgagtggtctcttaattgccTTTGTGCTGTACCCTAAGAACTGCTCCCTGATTGTATCCTTGCAAATTGTGAGT

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU37222 True 232 lncRNA 0.50 1 49105213 49105444

Neighbor

gene id symbol gene type direction distance location
AMCG00008262 stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842 coding upstream 165118 48923864 ~ 48940095 (+)
AMCG00008250 NA coding upstream 630681 48462293 ~ 48474532 (+)
AMCG00008253 stau1 coding upstream 729142 48347747 ~ 48376071 (+)
AMCG00008252 cse1l coding upstream 779075 48292639 ~ 48326138 (+)
AMCG00008251 arfgef2,LOC106532188 coding upstream 829865 48235687 ~ 48275348 (+)
AMCG00008272 NA coding downstream 363845 49469289 ~ 49471615 (+)
AMCG00008280 jph2,LOC107707015,LOC108275945 coding downstream 444462 49549906 ~ 49560080 (+)
AMCG00008281 NA coding downstream 481623 49587067 ~ 49596793 (+)
AMCG00008283 NA coding downstream 774535 49879979 ~ 49881352 (+)
AMCG00008291 NA coding downstream 1253543 50358987 ~ 50359865 (+)
G29722 NA non-coding upstream 137993 48966956 ~ 48967220 (+)
G29692 NA non-coding upstream 284519 48820475 ~ 48820694 (+)
G29677 NA non-coding upstream 301308 48762685 ~ 48803905 (+)
G29675 NA non-coding upstream 342916 48761972 ~ 48762297 (+)
G29661 NA non-coding upstream 429074 48674248 ~ 48676139 (+)
G29747 NA non-coding downstream 32072 49137516 ~ 49192216 (+)
G29748 NA non-coding downstream 33696 49139140 ~ 49147225 (+)
G29813 NA non-coding downstream 238594 49344038 ~ 49348022 (+)
G29823 NA non-coding downstream 263201 49368645 ~ 49379374 (+)
G29848 NA non-coding downstream 410040 49515484 ~ 49938346 (+)
AMCG00008249 NA other upstream 1163459 47929667 ~ 47941754 (+)
AMCG00008241 LOC106596195,LOC106601018,LOC105896344,LOC105896343 other upstream 1187085 47913868 ~ 47918128 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other upstream 1213142 47863569 ~ 47892071 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other upstream 1388631 47664517 ~ 47716582 (+)
AMCG00008232 ddx27 other upstream 1433792 47622952 ~ 47671421 (+)
AMCG00008263 NA other downstream 58372 49163816 ~ 49171017 (+)
AMCG00008270 ttpal other downstream 182802 49288246 ~ 49295359 (+)
AMCG00008271 NA other downstream 299412 49404856 ~ 49418746 (+)
AMCG00008279 NA other downstream 734068 49839512 ~ 49858576 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other downstream 1217269 50322713 ~ 50356404 (+)

Expression


Co-expression Network