G29806


Basic Information

Item Value
gene id G29806
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49328573 ~ 49328840 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37301
gtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctcatagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcctctaaagcagcaatatccttcttgaagtgtggtgcccagaactgcacacagtattccagatgaggtctaactagcgcattgtacagtcttaacattacttcccttgttctaaattct

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37301 True 268 lncRNA 0.45 1 49328573 49328840

Neighbor

gene id symbol gene type direction distance location
AMCG00008266 NA coding downstream 4570 49299533 ~ 49324003 (-)
AMCG00008265 ttpal,LOC107673079,LOC107716173 coding downstream 47575 49269620 ~ 49280998 (-)
AMCG00008261 NA coding downstream 159028 49144173 ~ 49169545 (-)
AMCG00008259 NA coding downstream 466969 48860155 ~ 48861604 (-)
AMCG00008260 NA coding downstream 489228 48838148 ~ 48839345 (-)
AMCG00008267 hnf4a,LOC107737506,LOC107673078,LOC107568408 coding upstream 16648 49345488 ~ 49361511 (-)
AMCG00008269 NA coding upstream 84552 49413392 ~ 49415125 (-)
AMCG00008268 gdap1l1,LOC102776784 coding upstream 149493 49478333 ~ 49479077 (-)
AMCG00008274 NA coding upstream 324730 49653570 ~ 49661750 (-)
AMCG00008275 NA coding upstream 381026 49709866 ~ 49711609 (-)
G29723 NA non-coding downstream 361230 48967038 ~ 48967343 (-)
G29717 LOC105897865 non-coding downstream 388474 48924113 ~ 48940099 (-)
G29695 NA non-coding downstream 485960 48842351 ~ 48842613 (-)
G29694 NA non-coding downstream 494751 48833539 ~ 48833822 (-)
G29676 NA non-coding downstream 566276 48761972 ~ 48762297 (-)
G29825 NA non-coding upstream 71329 49400169 ~ 49400479 (-)
G29826 NA non-coding upstream 71810 49400650 ~ 49400872 (-)
G29827 NA non-coding upstream 73209 49402049 ~ 49402258 (-)
G29834 NA non-coding upstream 82516 49411356 ~ 49417214 (-)
G29899 NA non-coding upstream 186644 49515484 ~ 49588805 (-)
AMCG00008264 NA other downstream 75329 49175725 ~ 49253244 (-)
AMCG00008255 NA other downstream 909640 48411085 ~ 48418933 (-)
AMCG00008256 arfgef2 other downstream 1037130 48202621 ~ 48291443 (-)
G29544 LOC100846954 other downstream 1203891 48123925 ~ 48124682 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other downstream 1410111 47666642 ~ 47918462 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other upstream 168560 49497400 ~ 49537281 (-)
G29928 NA other upstream 467131 49795971 ~ 49905089 (-)
G29974 LOC101154678 other upstream 724985 50053825 ~ 50054102 (-)
G30054 NA other upstream 944898 50273738 ~ 50274183 (-)
AMCG00008298 NA other upstream 1195147 50523987 ~ 50528036 (-)

Expression


Co-expression Network