G29974 (LOC101154678)


Basic Information

Item Value
gene id G29974
gene name LOC101154678
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50053825 ~ 50054102 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37508
gcctgattggtggagtgctgcagagatggttgttcttctggaaggttatcctctctccacagagacacgctggagctctgtcagagtgaccatcgtgttcttggtcacctccctgactaaggcccttcttccccgatcgctcagtttggccgggcggccagctctaggaagagtcctggtggttccaaacttcttccatttatggatgatggaggccactgtgctcattgggaccttcaatgctgcagaaatgtttctgtacccttccccagatctgt

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37508 True 278 TUCP 0.53 1 50053825 50054102

Neighbor

gene id symbol gene type direction distance location
AMCG00008284 LOC105895941,LOC108424612,LOC108255211,LOC103042686,LOC104930306,LOC103375199,LOC101473264 coding downstream 24205 49996960 ~ 50029620 (-)
AMCG00008282 NA coding downstream 66250 49947011 ~ 49987575 (-)
AMCG00008278 NA coding downstream 213738 49838196 ~ 49840087 (-)
AMCG00008276 slc13a3,LOC106572485 coding downstream 277857 49773114 ~ 49775968 (-)
AMCG00008277 NA coding downstream 301197 49739055 ~ 49752628 (-)
AMCG00008285 tcf15,LOC106567197,LOC107669611,LOC107594541 coding upstream 32991 50087093 ~ 50089767 (-)
AMCG00008286 NA coding upstream 61931 50116033 ~ 50119306 (-)
AMCG00008287 scrt2,LOC103139108,LOC102228875 coding upstream 93715 50147817 ~ 50155865 (-)
AMCG00008290 slc52a3 coding upstream 238230 50292332 ~ 50293363 (-)
AMCG00008289 LOC105022328,LOC106572481,LOC107572061,LOC107683645,LOC108425074,LOC103044311 coding upstream 254676 50308778 ~ 50313435 (-)
G29957 NA non-coding downstream 79179 49974426 ~ 49974646 (-)
G29926 NA non-coding downstream 265933 49786331 ~ 49787892 (-)
G29904 NA non-coding downstream 431865 49592278 ~ 49621960 (-)
G29908 NA non-coding downstream 439405 49610123 ~ 49614420 (-)
G29899 NA non-coding downstream 465020 49515484 ~ 49588805 (-)
G29987 NA non-coding upstream 71538 50125640 ~ 50126131 (-)
G30003 NA non-coding upstream 130930 50185032 ~ 50185277 (-)
G30049 NA non-coding upstream 197608 50251710 ~ 50251922 (-)
G30051 NA non-coding upstream 206654 50260756 ~ 50261187 (-)
G30053 NA non-coding upstream 212974 50267076 ~ 50267435 (-)
G29928 NA other downstream 148736 49795971 ~ 49905089 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other downstream 516544 49497400 ~ 49537281 (-)
AMCG00008264 NA other downstream 800581 49175725 ~ 49253244 (-)
AMCG00008255 NA other downstream 1634892 48411085 ~ 48418933 (-)
AMCG00008256 arfgef2 other downstream 1762382 48202621 ~ 48291443 (-)
G30054 NA other upstream 219636 50273738 ~ 50274183 (-)
AMCG00008298 NA other upstream 469885 50523987 ~ 50528036 (-)
AMCG00008318 NA other upstream 2275134 52329236 ~ 52339097 (-)
AMCG00008325 znf341,LOC106566899 other upstream 2326954 52381056 ~ 52384567 (-)

Expression


Co-expression Network