G29987


Basic Information

Item Value
gene id G29987
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50125640 ~ 50126131 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37522
GGGGGGGGGTAGTAGCAGCAACGACAACTGAGCGAGAAGACAACTGAGCGAGAAGACAACTGAGCGAGAAGACAACTGAGCGAGAAGACAACTGAGCGAGAAGACAACTGAGCGAGAAGACAACTGAGCGAGAAGACAACTGAGCGAGAAGCTCAGAGTTGACGGATTCAGCGAGAGCGGAGAAGGGAGAAgttcacagttgacggattcagTGGCTTACGAcactttttctggacctggaccattctccctcttgaacccaggactgtctgacaacctcccactggtaacgaactttgattacgaACTACGAACTTGCCTTGCCCCTGTCGTGCTTCAGTTTCCCCGGTGTTCGCCTCtaccgacccgggcatttactgttagtgtttgttttgtagttaggtATTGTTTacgtttagttttgttttgctttttgacactgtgcctgccattaagggaagcaataaaaccgcaagcctgttttgtaccctt

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37522 True 492 lncRNA 0.49 1 50125640 50126131

Neighbor

gene id symbol gene type direction distance location
AMCG00008286 NA coding downstream 6334 50116033 ~ 50119306 (-)
AMCG00008285 tcf15,LOC106567197,LOC107669611,LOC107594541 coding downstream 35873 50087093 ~ 50089767 (-)
AMCG00008284 LOC105895941,LOC108424612,LOC108255211,LOC103042686,LOC104930306,LOC103375199,LOC101473264 coding downstream 96020 49996960 ~ 50029620 (-)
AMCG00008282 NA coding downstream 138065 49947011 ~ 49987575 (-)
AMCG00008278 NA coding downstream 285553 49838196 ~ 49840087 (-)
AMCG00008287 scrt2,LOC103139108,LOC102228875 coding upstream 21686 50147817 ~ 50155865 (-)
AMCG00008290 slc52a3 coding upstream 166201 50292332 ~ 50293363 (-)
AMCG00008289 LOC105022328,LOC106572481,LOC107572061,LOC107683645,LOC108425074,LOC103044311 coding upstream 182647 50308778 ~ 50313435 (-)
AMCG00008293 ptpn1,LOC107669644,LOC107751444,LOC107556311,LOC106522952 coding upstream 271608 50397739 ~ 50406216 (-)
AMCG00008295 LOC107738191,LOC107754892,LOC107590469,LOC107558752,LOC106567112 coding upstream 324956 50451087 ~ 50518539 (-)
G29957 NA non-coding downstream 150994 49974426 ~ 49974646 (-)
G29926 NA non-coding downstream 337748 49786331 ~ 49787892 (-)
G29904 NA non-coding downstream 503680 49592278 ~ 49621960 (-)
G29908 NA non-coding downstream 511220 49610123 ~ 49614420 (-)
G29899 NA non-coding downstream 536835 49515484 ~ 49588805 (-)
G30003 NA non-coding upstream 58901 50185032 ~ 50185277 (-)
G30049 NA non-coding upstream 125579 50251710 ~ 50251922 (-)
G30051 NA non-coding upstream 134625 50260756 ~ 50261187 (-)
G30053 NA non-coding upstream 140945 50267076 ~ 50267435 (-)
G30058 NA non-coding upstream 188041 50314172 ~ 50314425 (-)
G29974 LOC101154678 other downstream 71538 50053825 ~ 50054102 (-)
G29928 NA other downstream 220551 49795971 ~ 49905089 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other downstream 588359 49497400 ~ 49537281 (-)
AMCG00008264 NA other downstream 872396 49175725 ~ 49253244 (-)
AMCG00008255 NA other downstream 1706707 48411085 ~ 48418933 (-)
G30054 NA other upstream 147607 50273738 ~ 50274183 (-)
AMCG00008298 NA other upstream 397856 50523987 ~ 50528036 (-)
AMCG00008318 NA other upstream 2203105 52329236 ~ 52339097 (-)
AMCG00008325 znf341,LOC106566899 other upstream 2254925 52381056 ~ 52384567 (-)

Expression


Co-expression Network