G30003


Basic Information

Item Value
gene id G30003
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50185032 ~ 50185277 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37538
gccacatccttgctacatgcagtcctgacattgtacaatgcaacatcttgctgaatatctgagttgggtggtctgtaacacactcctactactaatcctccggatctcttgttcaaaagtttgacccacaaagattctgtttcgttactgggatctaatttgagttcttctgcctcaatgtcatttttcacatataatgctaccccaccccctcttcgattttgcctgtctctcctaaactgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37538 True 246 lncRNA 0.43 1 50185032 50185277

Neighbor

gene id symbol gene type direction distance location
AMCG00008287 scrt2,LOC103139108,LOC102228875 coding downstream 29167 50147817 ~ 50155865 (-)
AMCG00008286 NA coding downstream 65726 50116033 ~ 50119306 (-)
AMCG00008285 tcf15,LOC106567197,LOC107669611,LOC107594541 coding downstream 95265 50087093 ~ 50089767 (-)
AMCG00008284 LOC105895941,LOC108424612,LOC108255211,LOC103042686,LOC104930306,LOC103375199,LOC101473264 coding downstream 155412 49996960 ~ 50029620 (-)
AMCG00008282 NA coding downstream 197457 49947011 ~ 49987575 (-)
AMCG00008290 slc52a3 coding upstream 107055 50292332 ~ 50293363 (-)
AMCG00008289 LOC105022328,LOC106572481,LOC107572061,LOC107683645,LOC108425074,LOC103044311 coding upstream 123501 50308778 ~ 50313435 (-)
AMCG00008293 ptpn1,LOC107669644,LOC107751444,LOC107556311,LOC106522952 coding upstream 212462 50397739 ~ 50406216 (-)
AMCG00008295 LOC107738191,LOC107754892,LOC107590469,LOC107558752,LOC106567112 coding upstream 265810 50451087 ~ 50518539 (-)
AMCG00008297 kcng1,LOC102780788,LOC107711602,LOC107558732 coding upstream 364788 50550065 ~ 50559321 (-)
G29987 NA non-coding downstream 58901 50125640 ~ 50126131 (-)
G29957 NA non-coding downstream 210386 49974426 ~ 49974646 (-)
G29926 NA non-coding downstream 397140 49786331 ~ 49787892 (-)
G29904 NA non-coding downstream 563072 49592278 ~ 49621960 (-)
G29908 NA non-coding downstream 570612 49610123 ~ 49614420 (-)
G30049 NA non-coding upstream 66433 50251710 ~ 50251922 (-)
G30051 NA non-coding upstream 75479 50260756 ~ 50261187 (-)
G30053 NA non-coding upstream 81799 50267076 ~ 50267435 (-)
G30058 NA non-coding upstream 128895 50314172 ~ 50314425 (-)
G30059 NA non-coding upstream 142993 50328270 ~ 50334605 (-)
G29974 LOC101154678 other downstream 130930 50053825 ~ 50054102 (-)
G29928 NA other downstream 279943 49795971 ~ 49905089 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other downstream 647751 49497400 ~ 49537281 (-)
AMCG00008264 NA other downstream 931788 49175725 ~ 49253244 (-)
AMCG00008255 NA other downstream 1766099 48411085 ~ 48418933 (-)
G30054 NA other upstream 88461 50273738 ~ 50274183 (-)
AMCG00008298 NA other upstream 338710 50523987 ~ 50528036 (-)
AMCG00008318 NA other upstream 2143959 52329236 ~ 52339097 (-)
AMCG00008325 znf341,LOC106566899 other upstream 2195779 52381056 ~ 52384567 (-)

Expression


Co-expression Network