G30017


Basic Information

Item Value
gene id G30017
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50273735 ~ 50274183 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37553
ATACTCTGCCACTGCTTCATTATAGAACTGAATAGTTACTATTtttatctctctgtctgtcagggCGTCGACCACAAAGTCACTCAGGGGCATACTATCTTTTTTATCTCTATACAAATCCCAAAAACTCTCCAGCACTTGAGGGTTCTTAAAGCTCACCTCAAACACGTCCCTAGGTCCAGGCAGTTTAACCACACAGTTCAGCTCAGAAGGGGCAAAGCCCAGGCCCCTCTGCAGCACGGACCTGCTGAACTCCAGCCGGGTGAGGGCCGCGGTCTCGGCTCCAGCCTCACGGCTGAAGCGCACCGCATTATGGCGCCTCACACCGGCGGTTCGCTGGGCCATGCTGCGCTTTCCTACCTGGGAGAAGGGTCGGGAGGCTCTCAATCCGGAGGTCGGGGCAAGTCCACATGGCTGGGGAGCAGCTTCCACCTCCGGGGCTCTTGCag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37553 True 449 lncRNA 0.56 1 50273735 50274183

Neighbor

gene id symbol gene type direction distance location
AMCG00008283 NA coding upstream 392383 49879979 ~ 49881352 (+)
AMCG00008281 NA coding upstream 676942 49587067 ~ 49596793 (+)
AMCG00008280 jph2,LOC107707015,LOC108275945 coding upstream 713655 49549906 ~ 49560080 (+)
AMCG00008272 NA coding upstream 802120 49469289 ~ 49471615 (+)
AMCG00008262 stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842 coding upstream 1333640 48923864 ~ 48940095 (+)
AMCG00008291 NA coding downstream 84804 50358987 ~ 50359865 (+)
AMCG00008292 NA coding downstream 92261 50366444 ~ 50403958 (+)
AMCG00008294 NA coding downstream 177127 50451310 ~ 50460054 (+)
AMCG00008296 NA coding downstream 288571 50562754 ~ 50582183 (+)
AMCG00008304 NA coding downstream 1059120 51333303 ~ 51336685 (+)
G30016 NA non-coding upstream 6285 50267223 ~ 50267450 (+)
G29991 NA non-coding upstream 117473 50155704 ~ 50156262 (+)
G29990 scrt2,LOC106572483,LOC103139108 non-coding upstream 125012 50147649 ~ 50148723 (+)
G29986 NA non-coding upstream 147604 50125690 ~ 50126131 (+)
G29979 NA non-coding upstream 178462 50095038 ~ 50095273 (+)
G30010 ub2v1,LOC105022328,LOC107557526,LOC106572481,LOC108425074 non-coding downstream 33917 50308100 ~ 50311209 (+)
G30012 NA non-coding downstream 171674 50445857 ~ 50448965 (+)
G30073 NA non-coding downstream 254350 50528533 ~ 50530747 (+)
G30078 NA non-coding downstream 261591 50535774 ~ 50535987 (+)
G30083 NA non-coding downstream 281201 50555384 ~ 50555589 (+)
AMCG00008279 NA other upstream 415159 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 854989 49404856 ~ 49418746 (+)
AMCG00008270 ttpal other upstream 978376 49288246 ~ 49295359 (+)
AMCG00008263 NA other upstream 1102718 49163816 ~ 49171017 (+)
AMCG00008249 NA other upstream 2331981 47929667 ~ 47941754 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other downstream 48530 50322713 ~ 50356404 (+)
G30166 NA other downstream 1152398 51426581 ~ 51428055 (+)
G30232 NA other downstream 1826579 52100762 ~ 52101524 (+)
G30299 NA other downstream 2104146 52378329 ~ 52378776 (+)
G30300 NA other downstream 2107158 52381341 ~ 52382418 (+)

Expression


Co-expression Network