G30049


Basic Information

Item Value
gene id G30049
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50251710 ~ 50251922 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37586
attaaattcattattttcctcaaagttctacaaacaataccccacaatgacaacgtgaaagaagtttgaaatctttgcaaatttattaaaaaaaaaaaaaaaaaaagcacatgtacataagtattcacagcttttgctcaatactttgttgaagcacctttggcaccaattacagcctcaagtctttttgagtatgatgctacaagcttggca

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37586 True 213 lncRNA 0.31 1 50251710 50251922

Neighbor

gene id symbol gene type direction distance location
AMCG00008287 scrt2,LOC103139108,LOC102228875 coding downstream 95845 50147817 ~ 50155865 (-)
AMCG00008286 NA coding downstream 132404 50116033 ~ 50119306 (-)
AMCG00008285 tcf15,LOC106567197,LOC107669611,LOC107594541 coding downstream 161943 50087093 ~ 50089767 (-)
AMCG00008284 LOC105895941,LOC108424612,LOC108255211,LOC103042686,LOC104930306,LOC103375199,LOC101473264 coding downstream 222090 49996960 ~ 50029620 (-)
AMCG00008282 NA coding downstream 264135 49947011 ~ 49987575 (-)
AMCG00008290 slc52a3 coding upstream 40410 50292332 ~ 50293363 (-)
AMCG00008289 LOC105022328,LOC106572481,LOC107572061,LOC107683645,LOC108425074,LOC103044311 coding upstream 56856 50308778 ~ 50313435 (-)
AMCG00008293 ptpn1,LOC107669644,LOC107751444,LOC107556311,LOC106522952 coding upstream 145817 50397739 ~ 50406216 (-)
AMCG00008295 LOC107738191,LOC107754892,LOC107590469,LOC107558752,LOC106567112 coding upstream 199165 50451087 ~ 50518539 (-)
AMCG00008297 kcng1,LOC102780788,LOC107711602,LOC107558732 coding upstream 298143 50550065 ~ 50559321 (-)
G30003 NA non-coding downstream 66433 50185032 ~ 50185277 (-)
G29987 NA non-coding downstream 125579 50125640 ~ 50126131 (-)
G29957 NA non-coding downstream 277064 49974426 ~ 49974646 (-)
G29926 NA non-coding downstream 463818 49786331 ~ 49787892 (-)
G29904 NA non-coding downstream 629750 49592278 ~ 49621960 (-)
G30051 NA non-coding upstream 8834 50260756 ~ 50261187 (-)
G30053 NA non-coding upstream 15154 50267076 ~ 50267435 (-)
G30058 NA non-coding upstream 62250 50314172 ~ 50314425 (-)
G30059 NA non-coding upstream 76348 50328270 ~ 50334605 (-)
G30061 NA non-coding upstream 101973 50353895 ~ 50356348 (-)
G29974 LOC101154678 other downstream 197608 50053825 ~ 50054102 (-)
G29928 NA other downstream 346621 49795971 ~ 49905089 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other downstream 714429 49497400 ~ 49537281 (-)
AMCG00008264 NA other downstream 998466 49175725 ~ 49253244 (-)
AMCG00008255 NA other downstream 1832777 48411085 ~ 48418933 (-)
G30054 NA other upstream 21816 50273738 ~ 50274183 (-)
AMCG00008298 NA other upstream 272065 50523987 ~ 50528036 (-)
AMCG00008318 NA other upstream 2077314 52329236 ~ 52339097 (-)
AMCG00008325 znf341,LOC106566899 other upstream 2129134 52381056 ~ 52384567 (-)

Expression


Co-expression Network