G30073


Basic Information

Item Value
gene id G30073
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50528533 ~ 50530747 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37622
AGAGCTTAGAGCCATGTCTTTGGAAGCATACAGAGAGGTGATTTGTGacatgattttaaaacacaacacgCACACGGACATTGCAGAGCACCTGTGTCAACTTAGTGCCGGGCGAGGTTGTTCGGCGAGGAGTGTCAGAAGATTTTGTGCCAGTCACTGTCTGACACTCAGCTGGAGATAGCTGTATCGATAGCAGTACAAGAAGCCTGCTGTAAT

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU37622 True 216 lncRNA 0.48 2 50528533 50530747

Neighbor

gene id symbol gene type direction distance location
AMCG00008294 NA coding upstream 68479 50451310 ~ 50460054 (+)
AMCG00008292 NA coding upstream 124575 50366444 ~ 50403958 (+)
AMCG00008291 NA coding upstream 168668 50358987 ~ 50359865 (+)
AMCG00008283 NA coding upstream 647181 49879979 ~ 49881352 (+)
AMCG00008281 NA coding upstream 931740 49587067 ~ 49596793 (+)
AMCG00008296 NA coding downstream 32007 50562754 ~ 50582183 (+)
AMCG00008304 NA coding downstream 802556 51333303 ~ 51336685 (+)
AMCG00008309 NA coding downstream 1004723 51535470 ~ 51542896 (+)
AMCG00008308 pfdn4,pfd4,LOC107697845,LOC107758785 coding downstream 1021859 51552606 ~ 51560087 (+)
AMCG00008310 NA coding downstream 1121617 51652364 ~ 51657000 (+)
G30012 NA non-coding upstream 79568 50445857 ~ 50448965 (+)
G30010 ub2v1,LOC105022328,LOC107557526,LOC106572481,LOC108425074 non-coding upstream 217324 50308100 ~ 50311209 (+)
G30017 NA non-coding upstream 254350 50273735 ~ 50274183 (+)
G30016 NA non-coding upstream 261083 50267223 ~ 50267450 (+)
G29991 NA non-coding upstream 372271 50155704 ~ 50156262 (+)
G30078 NA non-coding downstream 5027 50535774 ~ 50535987 (+)
G30083 NA non-coding downstream 24637 50555384 ~ 50555589 (+)
G30099 NA non-coding downstream 219633 50750380 ~ 50752307 (+)
G30102 NA non-coding downstream 261328 50792075 ~ 50792290 (+)
G30104 NA non-coding downstream 267373 50798120 ~ 50798319 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other upstream 172129 50322713 ~ 50356404 (+)
AMCG00008279 NA other upstream 669957 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 1109787 49404856 ~ 49418746 (+)
AMCG00008270 ttpal other upstream 1233174 49288246 ~ 49295359 (+)
AMCG00008263 NA other upstream 1357516 49163816 ~ 49171017 (+)
G30166 NA other downstream 895834 51426581 ~ 51428055 (+)
G30232 NA other downstream 1570015 52100762 ~ 52101524 (+)
G30299 NA other downstream 1847582 52378329 ~ 52378776 (+)
G30300 NA other downstream 1850594 52381341 ~ 52382418 (+)
AMCG00008334 prex1 other downstream 2460538 52991285 ~ 53087480 (+)

Expression


Co-expression Network