G30086


Basic Information

Item Value
gene id G30086
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50601457 ~ 50602050 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37636
gtaaaaagtagtcggaagtcatacttgagtaaaagtaaaaatattctatcaaaaacatatgtaacgggttggggggcccgtcacaagaaagggctgtatgtaggcgggggTCTGGTCtggaaacacacagtagggatgcaggcagagggtacaaaacaggcttgccgttttattgcttcccttaatggcaggcacagtgtcaaaaagcaaaacaaaacctagctctgtgcgagcactaactaaacaatccctaactaaaaacaaacactaacaataaatgcccgggtcggtggagccgaacaccgggcaaACAGAAGCATAAAGGGAtaaggcaggttcgtagtcacagtccgtaatcaaagttcgttaccagtgggaggttgtcagacagtccggggtccaagagggagaatggtccaggtccagaaaaaaaGGTCacaagccagtgaatccgtcaactgtgaacTTTACCCTTGTTTCTCCtgctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgcctctcgccgtcctgtgcaccttgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37636 True 594 lncRNA 0.51 1 50601457 50602050

Neighbor

gene id symbol gene type direction distance location
AMCG00008297 kcng1,LOC102780788,LOC107711602,LOC107558732 coding downstream 42136 50550065 ~ 50559321 (-)
AMCG00008295 LOC107738191,LOC107754892,LOC107590469,LOC107558752,LOC106567112 coding downstream 82918 50451087 ~ 50518539 (-)
AMCG00008293 ptpn1,LOC107669644,LOC107751444,LOC107556311,LOC106522952 coding downstream 195241 50397739 ~ 50406216 (-)
AMCG00008289 LOC105022328,LOC106572481,LOC107572061,LOC107683645,LOC108425074,LOC103044311 coding downstream 288022 50308778 ~ 50313435 (-)
AMCG00008290 slc52a3 coding downstream 308094 50292332 ~ 50293363 (-)
AMCG00008300 nfatc2 coding upstream 190026 50792076 ~ 50798319 (-)
AMCG00008299 NA coding upstream 208329 50810379 ~ 50813806 (-)
AMCG00008302 atp9a,LOC106567116 coding upstream 238210 50840260 ~ 50916380 (-)
AMCG00008301 NA coding upstream 322002 50924052 ~ 50936800 (-)
AMCG00008303 zfp64,LOC106572631,LOC104953815 coding upstream 425218 51027268 ~ 51036822 (-)
G30070 NA non-coding downstream 152487 50445719 ~ 50448970 (-)
G30065 NA non-coding downstream 214898 50386260 ~ 50386559 (-)
G30061 NA non-coding downstream 245109 50353895 ~ 50356348 (-)
G30059 NA non-coding downstream 266852 50328270 ~ 50334605 (-)
G30058 NA non-coding downstream 287032 50314172 ~ 50314425 (-)
G30091 NA non-coding upstream 11538 50613588 ~ 50613903 (-)
G30094 NA non-coding upstream 52169 50654219 ~ 50654513 (-)
G30096 NA non-coding upstream 57894 50659944 ~ 50660176 (-)
G30108 NA non-coding upstream 148371 50750421 ~ 50753174 (-)
G30143 NA non-coding upstream 466090 51068140 ~ 51068561 (-)
AMCG00008298 NA other downstream 73421 50523987 ~ 50528036 (-)
G30054 NA other downstream 327274 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 547355 50053825 ~ 50054102 (-)
G29928 NA other downstream 696368 49795971 ~ 49905089 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other downstream 1064176 49497400 ~ 49537281 (-)
AMCG00008318 NA other upstream 1727186 52329236 ~ 52339097 (-)
AMCG00008325 znf341,LOC106566899 other upstream 1779006 52381056 ~ 52384567 (-)

Expression


Co-expression Network