G30096


Basic Information

Item Value
gene id G30096
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50659944 ~ 50660176 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37646
aaaattctgtctCCAGTGTTACAGACAGTACACCTATAAAGAGGATAAACCCCACAAGTGTGCCGCTCTGAGGTGTCATCTCTGTAACGCCGACTTAACACCCGAGACCGAACACCAATGTTTCATACAGTCTGTTAAACCGGCACCCCTACATAACAAGTATGTCTTTTATGACTTTGAGTGTAGGCAGGAAGGAGGCGTTCATATAGCGaattatattcactgtataGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37646 True 233 lncRNA 0.43 1 50659944 50660176

Neighbor

gene id symbol gene type direction distance location
AMCG00008297 kcng1,LOC102780788,LOC107711602,LOC107558732 coding downstream 100623 50550065 ~ 50559321 (-)
AMCG00008295 LOC107738191,LOC107754892,LOC107590469,LOC107558752,LOC106567112 coding downstream 141405 50451087 ~ 50518539 (-)
AMCG00008293 ptpn1,LOC107669644,LOC107751444,LOC107556311,LOC106522952 coding downstream 253728 50397739 ~ 50406216 (-)
AMCG00008289 LOC105022328,LOC106572481,LOC107572061,LOC107683645,LOC108425074,LOC103044311 coding downstream 346509 50308778 ~ 50313435 (-)
AMCG00008290 slc52a3 coding downstream 366581 50292332 ~ 50293363 (-)
AMCG00008300 nfatc2 coding upstream 131900 50792076 ~ 50798319 (-)
AMCG00008299 NA coding upstream 150203 50810379 ~ 50813806 (-)
AMCG00008302 atp9a,LOC106567116 coding upstream 180084 50840260 ~ 50916380 (-)
AMCG00008301 NA coding upstream 263876 50924052 ~ 50936800 (-)
AMCG00008303 zfp64,LOC106572631,LOC104953815 coding upstream 367092 51027268 ~ 51036822 (-)
G30094 NA non-coding downstream 5431 50654219 ~ 50654513 (-)
G30091 NA non-coding downstream 46041 50613588 ~ 50613903 (-)
G30086 NA non-coding downstream 57894 50601457 ~ 50602050 (-)
G30070 NA non-coding downstream 210974 50445719 ~ 50448970 (-)
G30065 NA non-coding downstream 273385 50386260 ~ 50386559 (-)
G30108 NA non-coding upstream 90245 50750421 ~ 50753174 (-)
G30143 NA non-coding upstream 407964 51068140 ~ 51068561 (-)
G30149 NA non-coding upstream 522498 51182674 ~ 51182933 (-)
G30170 NA non-coding upstream 760471 51420647 ~ 51421417 (-)
G30172 NA non-coding upstream 765155 51425331 ~ 51425584 (-)
AMCG00008298 NA other downstream 131908 50523987 ~ 50528036 (-)
G30054 NA other downstream 385761 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 605842 50053825 ~ 50054102 (-)
G29928 NA other downstream 754855 49795971 ~ 49905089 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other downstream 1122663 49497400 ~ 49537281 (-)
AMCG00008318 NA other upstream 1669060 52329236 ~ 52339097 (-)
AMCG00008325 znf341,LOC106566899 other upstream 1720880 52381056 ~ 52384567 (-)

Expression


Co-expression Network