G30166


Basic Information

Item Value
gene id G30166
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51426581 ~ 51428055 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37728
GGGCACCTTGCCCACCACTGGCCCCACTGGGGTTATACAGTGAGGCCAGGTCACTAGGGCTGTAGGATCGGAGGATATTGATGACTTTCCAGTCTGGTTCCATTCCGTTGGCGGATGTGGAGGAGATGGATTTGACCGAAGTCATCTTGGAAGGCGAGTTTCCCTGCGATGAGGTCATCGTGGCTCTCCCAGCAGACACCAGCTTGCCGTAGCTGTCCCCTCTCCGCACAGCGGTGCCCTCTGGAGGGTCCTGCTCACGGCTCATTGGGCCGGAGAGCTTGTGTCTCTTGCTGGAGGGCTCCCCGTAGTCCGCGTGGGGAGAGTGTCGGAACCGACTTGACAGACACGTCCTCGCCGTGTCACTGGGCCACACGGCCCCATTCCTGGTCTGTTGAACCCTGGATACTGGTCCTTCTCTGTCCACATAGTTCTGCTGTACGGACACCACAAAATTGTCCCTTTTGTTGTGTAAGTCCGAATCCCTGGACTTCTCCGTGTATTTAGCGGTGCCTGGCCTGCCCTCAGTCATGGACATCCGTCGACTGCTGCCTGGGACGTCCCCCACCCTGTAGCGTTGCTGTGTGTCCTGAGGGGCTCCTTTCCTGCCATGGGCTTCAGGGGAGTGCACCACTGCTTGAGAAGGCCGTGCAGGAGGAGCTCTCTCAGCTGCTTTGGCTGCCTGGTGAGTTGGAGATTTGGTCCGGCGAGCATGTCTCCTATAAAAAGGAGGCAAGGGAGCAACATCGTTACCCTCGAGCGCCGGTGGGCAGCCGGTGTACCGCTTCAGTTTGCGTCCAGCCAGTGTGCTTCTTAAGCCATTTTTCTTTGTAGCATCAGGTTTTTCTTTATGTACCAGTTTCTTGTGCATTAGAAGGACCTCTGGGTATAGAGTTTTAAAGACGCATAAAGGGCAGGTACTGGTGATTAATGCGCTCTTGGGAACTGAGGTAGCAGAAACCGAAAGGGACATCTTAAAGGACAAATTTAATGGCATCTCAAATGACTCTTCTTTCATCTCTTTTCCTTCCATCTTCAGATTGAGTGATAAGGCGTACTTTTTAAGTGCTTCATCACCCGAGCCTGAAGGATGCTCAGCCGCACCGGACAAGCTCTCACATTCTGTTTTGACGGTACTGCCCTGGGTACGTTGGCAGGGGTTCTTGATAACGGTCTTGCCGGAGATCAGATTATTTTGAGCGGTGACAGGAGACGCATGTTCGGGCCCCATGCTGGACACAGGCCATGGTTTGGATTGCTTTTCATCTTGGTTGCCGTCGGCATTTTTGGCTAATTCCTGAGAAGATTTATCCTTGGCAGGCAAAACATAGTCTGGAGTTGGTGACGCCGACACAATTTTAGCAGAAGTCTCAGCATCAGGGTGCTTGTCTTTATGACGTCTCTCCAAGTGATATCTTAGTGAGGTCTTCTGAGCTGCAGCATAATCACAGAATTCACATTTATATGGTTTTTCACct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37728 True 1475 TUCP 0.53 1 51426581 51428055

Neighbor

gene id symbol gene type direction distance location
AMCG00008304 NA coding upstream 89896 51333303 ~ 51336685 (+)
AMCG00008296 NA coding upstream 844398 50562754 ~ 50582183 (+)
AMCG00008294 NA coding upstream 966527 50451310 ~ 50460054 (+)
AMCG00008292 NA coding upstream 1022623 50366444 ~ 50403958 (+)
AMCG00008291 NA coding upstream 1066716 50358987 ~ 50359865 (+)
AMCG00008309 NA coding downstream 107415 51535470 ~ 51542896 (+)
AMCG00008308 pfdn4,pfd4,LOC107697845,LOC107758785 coding downstream 124551 51552606 ~ 51560087 (+)
AMCG00008310 NA coding downstream 224309 51652364 ~ 51657000 (+)
AMCG00008316 NA coding downstream 838378 52266433 ~ 52311801 (+)
AMCG00008320 NA coding downstream 883834 52311889 ~ 52315183 (+)
G30165 NA non-coding upstream 1631 51424663 ~ 51424950 (+)
G30164 NA non-coding upstream 3043 51420647 ~ 51423538 (+)
G30158 NA non-coding upstream 46788 51379568 ~ 51379793 (+)
G30146 NA non-coding upstream 248198 51178179 ~ 51178383 (+)
G30139 NA non-coding upstream 357874 51068140 ~ 51068707 (+)
G30169 NA non-coding downstream 13298 51441353 ~ 51441568 (+)
G30174 NA non-coding downstream 36469 51464524 ~ 51466267 (+)
G30195 NA non-coding downstream 87420 51515475 ~ 51515731 (+)
G30205 NA non-coding downstream 136058 51564113 ~ 51571558 (+)
G30206 NA non-coding downstream 142667 51570722 ~ 51587545 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other upstream 1070177 50322713 ~ 50356404 (+)
AMCG00008279 NA other upstream 1568005 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 2007835 49404856 ~ 49418746 (+)
AMCG00008270 ttpal other upstream 2131222 49288246 ~ 49295359 (+)
AMCG00008263 NA other upstream 2255564 49163816 ~ 49171017 (+)
G30232 NA other downstream 672707 52100762 ~ 52101524 (+)
G30299 NA other downstream 950274 52378329 ~ 52378776 (+)
G30300 NA other downstream 953286 52381341 ~ 52382418 (+)
AMCG00008334 prex1 other downstream 1563230 52991285 ~ 53087480 (+)
AMCG00008335 NA other downstream 1682948 53111003 ~ 53148134 (+)

Expression


Co-expression Network