G30232


Basic Information

Item Value
gene id G30232
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52100762 ~ 52101524 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU37800
actaaaataggtggctcagcagatacaatcttggcagcacaggctattcagagggacttagataatattcagttgtgggctgacacctggcaaatgaaattcaatgtggacaagtgcaaggtaattcatgcaggtaacaaaaatgtccactataattacactatgggaggtacagatctagatgaagtaacgcatgagaaagacctaggagtctatgtggactcctcaagcatccatccaagcaatgtggggaagcaataaaaaaggcaaatagaatgctagggtatattgtcaaaagtgtagaatttaaaacaagggaagtaatgttaagactgtacaatgcgctagttagacctcatctggaatactgtgtacagttctgggcaccacacttcaagaaggatattgctgctttagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactcggagagactgagggaactgaaccttttcaccctggaacagaggagactatgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagctggtttacacagagagtagtcacaatctggaataaactacccagcgatgtggtagaagctgaaagtttgggaacatttaaaaatagtctggataggatccttggatcacttagatattaatgaacaccaaacgagcacgatgggtcgaatggccccctctcgtttgtaaactttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37800 True 763 TUCP 0.43 1 52100762 52101524

Neighbor

gene id symbol gene type direction distance location
AMCG00008310 NA coding upstream 443762 51652364 ~ 51657000 (+)
AMCG00008308 pfdn4,pfd4,LOC107697845,LOC107758785 coding upstream 540675 51552606 ~ 51560087 (+)
AMCG00008309 NA coding upstream 557866 51535470 ~ 51542896 (+)
AMCG00008304 NA coding upstream 764077 51333303 ~ 51336685 (+)
AMCG00008296 NA coding upstream 1518579 50562754 ~ 50582183 (+)
AMCG00008316 NA coding downstream 164909 52266433 ~ 52311801 (+)
AMCG00008320 NA coding downstream 210365 52311889 ~ 52315183 (+)
AMCG00008315 NA coding downstream 270774 52372298 ~ 52376305 (+)
AMCG00008326 NA coding downstream 346425 52447949 ~ 52483301 (+)
AMCG00008328 snta1 coding downstream 435756 52537280 ~ 52551487 (+)
G30219 NA non-coding upstream 311615 51788910 ~ 51789147 (+)
G30206 NA non-coding upstream 513217 51570722 ~ 51587545 (+)
G30205 NA non-coding upstream 529204 51564113 ~ 51571558 (+)
G30195 NA non-coding upstream 585031 51515475 ~ 51515731 (+)
G30174 NA non-coding upstream 634495 51464524 ~ 51466267 (+)
G30269 NA non-coding downstream 187366 52288890 ~ 52289123 (+)
G30283 NA non-coding downstream 235520 52337044 ~ 52337267 (+)
G30297 NA non-coding downstream 275935 52377459 ~ 52377854 (+)
G30166 NA other upstream 672707 51426581 ~ 51428055 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other upstream 1744358 50322713 ~ 50356404 (+)
AMCG00008279 NA other upstream 2242186 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 2682016 49404856 ~ 49418746 (+)
AMCG00008270 ttpal other upstream 2805403 49288246 ~ 49295359 (+)
G30299 NA other downstream 276805 52378329 ~ 52378776 (+)
G30300 NA other downstream 279817 52381341 ~ 52382418 (+)
AMCG00008334 prex1 other downstream 889761 52991285 ~ 53087480 (+)
AMCG00008335 NA other downstream 1009479 53111003 ~ 53148134 (+)

Expression


Co-expression Network