G30479


Basic Information

Item Value
gene id G30479
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 53411994 ~ 53416431 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38106
TGTAGTATCCTTTGGACTATGGAAAATGGCACACCTTTTCAAGCCTACAAAATGCAATGTGGCAACAGTATTAtcagttatttaaaaggaaTTAAGGTTACATCTGCATGGAATTATTCAGAGCTGTCATTTAGGTGCCTCCAGCAAGTGAAGCTGATAGTAAGTACAGTATATACGAAATGATGTACAGTAGAAGAGGTTTCTTAAGGCAAAGTTATAACCTATTCAAGTACTAGCACAACACGCTCTCTGCACAAATTAGGCGAAATAGGGCATACATCAATGAAGCTAAGCAGGTTGGCCCTTGTTAGTACTTGAAGGGAAGACTATGAAGGTTATAACCTATCTGGCcattatggaaaacaaatatggaaGTTGTATGGGTGggtatgtgtgcatgtgcagtCGTTGCACTGCTTATCCAACTTTAATACTTTTGTGGATCCTTTTTGTCAGGAAATGGAAAACCCGGAACTGAACTAGATTTAGCAACCATAGCATTTGAAttgactttatttttgtgtggtcTTTTCCAATCACCATACCTTGCAATCAGTTGTTTCTAGCAGAGAAATTTGACATTGTGGACTGACATTGCGGTTTGTCTGAAAACCATCAGTTTTGCTAGCGCTGAGTTTAACCTCTCTTGGGTAGTACAATCTCAAGCACAATCATCTAGATCAAGTCGAAATACTGTAAAAATTCCAACACTTACACAATCCTTCTTCGAGAATGTCAATGAGATATACCGTTGGGCAGGCACTAAGTCAGGatgttgtttcattttgtttttgtcttgttccCAGGAGACATGAATTTTGACAGAGTAAATTAATTCCTGGTAAATCAGCTGCAGCCTAGTGATGTTAATATGCCATCCTCTAGTTGACAGAACGAGGAACTATAGGACTCCATAGCACCAAATTCAGCCTCATCATGGTAACATTTCAGTCACGGTATATACAAACTGCAGGACTAAAAAGATGAGTTGTGGTGTGGTAGTAATGATGCATTTTGAGGGATGACTAGGTTAAGTACTAGCTTTCAAACTGCAATCCTGAATTAAGAAAAAGGTATTTACAGGGgtgggaggaaaaaaactaaaaacaagctTCAAGTCAGAATTCCATGTCAAGCAAACACTCTTGTACAGCATAATATCTTGCAGGTTTTGTTTCCTATGTCGTACTATCGTTACTGCAGTAataagatgaaaagaaaaagaaaaggaaaagaacaatTTTGGCTCAAGCAATTCTTGCACACGTACATACGATCAGTAAATATTTCGGAACAGACAATTATAATACACAATGACGGaaatggcagtttttttttttttgtttttttttttaacatgatgaAATTCAACCTTTAGATTTGCATTTGCCTGGGAGATTTATTGGTTGTGCTTCAATCTTGTTAAGTTGCCTACATAATTTCAAATACTTACGTATGCaagtacagaaattaaaatgatctggctttttattttattattttggtcaATTGTTTTTTGAATGCTACAAAGCAgtgaaaaatgattaaattgcaatctttttattatatatgtatgtgcacAGGCCACACAACTATGCTTTCTAGCAAAAGCAAGTCAAGATTACTGTTCTAGTTTTGCGAAAACCTTTAGGTCTGTTATACCATTCAAGTAGGGAATTTACCTACAACTATTGTTATTTAATACCATCGCAATAATTGTTGTGTGCCTTTTGTCAtcagatcatttaaataaaaatcaaggaAAACCTAAAGGCTGAATTTTGAAAGTAATATTAGAAGAGGAAAGGTTTCATAGGCAAAATACAGAGTAATGTTGTGAATGAACTAGTTGCAAGTATTCTAATTGTAAATTGATCTCCTATTGCACGAAGAATGGATTTTGTTTGTAGATGCAGAACAATGTATGACCTTTgatacagaaatattaaaaaaagttgcATTTTCCTAGCCAAAACTCTTCAGATGTGGAATTTCTTGATAAAGTCGTAGAAAATGTCTTCAACCAGAAAGTTCTGCTTGCAGCTCCTTGTTTCGGCGGACTTCAGCGGCATGCCTCTCCTAGTgagacacaggagagagagagtgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaagagagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38106 True 2184 lncRNA 0.36 2 53411994 53416431

Neighbor

gene id symbol gene type direction distance location
AMCG00008341 NA coding downstream 54776 53305798 ~ 53357218 (-)
AMCG00008339 NA coding downstream 108654 53300476 ~ 53303340 (-)
AMCG00008340 NA coding downstream 130423 53276379 ~ 53281571 (-)
AMCG00008332 NA coding downstream 762432 52626515 ~ 52649562 (-)
AMCG00008331 NA coding downstream 827969 52572120 ~ 52584025 (-)
G30417 NA non-coding downstream 263821 53145185 ~ 53148173 (-)
G30409 NA non-coding downstream 329092 53079584 ~ 53082902 (-)
G30276 NA non-coding downstream 1085603 52326161 ~ 52326391 (-)
G30275 NA non-coding downstream 1085957 52325705 ~ 52326037 (-)
G30270 NA non-coding downstream 1122871 52288890 ~ 52289123 (-)
G30486 NA non-coding upstream 14521 53430952 ~ 53434101 (-)
G30505 NA non-coding upstream 70410 53486841 ~ 53491107 (-)
G30501 NA non-coding upstream 83308 53499739 ~ 53506725 (-)
AMCG00008325 znf341,LOC106566899 other downstream 1027427 52381056 ~ 52384567 (-)
AMCG00008318 NA other downstream 1072897 52329236 ~ 52339097 (-)
AMCG00008298 NA other downstream 2883958 50523987 ~ 50528036 (-)
G30054 NA other downstream 3137811 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 3357892 50053825 ~ 50054102 (-)

Expression


Co-expression Network