AMCG00008363


Basic Information

Item Value
gene id AMCG00008363
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 60289 ~ 70750 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008363
TGGGGGGCAGTTAGCCACTGCTCTGCTCATTCTGATGTAATTTGCTGCAGATTCCTGTGTCACCTTACCACACAGCTCTGACCAGTGGCCAGACTGTATTATTGCATCTGAGTTCATTATTAGTCGATTGAACAGTCATTGTCCGAAGCCATTATAAACTCCCTTGGGGCCGCTGACGTCACAGCCTCATGGGCAGTGGTTCCAGGTGCCGGTCCGCGACTGTCGTGTCCCCCTACAGCTGCTCTAGTGCGGGTCAGGCGACCAATCTGCTGCCGTCTCTCTCACGATGTTGATCTCTCAGCCAATCGGAATGAGTTGCTTCTATCGCCGTGGAGTTTGAACAGGGACGGAGATCGACTACCTCAATAAAACCACCCGGACAGCAGCCAGTGCAGGACAGCCTCCGCCCGCCGCTGGCCGGCTCCCTCATGACCCACCGGACCAGCCCGCCGCTCTTCCGCCCGCCGGGGGCCACGCAGTGGCGCAGCACGGAGCCGCTCAGAGCCGTGTCCACGATGATGGAGTCCACACGCTGGCCAACGGACTCTGAGCTCGACTCCAGGTCACCAGGGCTGCAGGACACCTTCAGTATCGACTCTCCATGCAGCCCCCACCACACTGACCGGCTCTACAGTGCCGAGACCGCAGCGCTGGGGCTGCCCTCCGTGTGTGAGGGGGAACAGGGCCGAACGAGCTCCTCTGTGGTGGTCCTGCTGAACTGCGCCTGGTCCCTGCTCACCCTGCACCAGCAGACCCGGACCAGACTGAGAcaggcggagagagagagagagcgaatgGACACCCTGAggGAGAAGCTGCAGGAGAGGGATGTCCATGTCGCTGCGCTGCAGGACAGCCTGAGGACGCTGCGGGAGCAGAACTCGGAGCTGCACAGCTCTCTGAGGGCGGAGAGGGAGCAGTGTGTGCGGCTGCGGTCCCGGGACACCCAGCAGGCCGCGGAGCTGAGGCGACGGGAGCAGCAGCGGGAGGAGGCGCTGCAGCGGCTGCTGGAGGCGGGGCAGGCGGAGCTGCAGGGGGCGGAGTCTCGCAGTCACCGCCTCGCTGGCCTGCTGGCCGGACTGAGCCGAGACATGGGCGGCCTGCTGTGCCGGGGCGGGGCGGCCCCGGACGATGTGGAGGCTGGGGGGGAGGGTCCAGATTGGGAGCAGCTGGTCCAATCGGAGGCAGATCTGGGGGACCATGTGACTGGGGGCGTGGTGCGGCTGTGGAGCAGCGTGAGGATGATCCTGGAGGAGCTGCCGACACACGGCTTTTCCTCAGTGCCCATGGGTACAGACCAAGAGAAGCAGCTGGCGCAGCTGCAGGTGGAACTGGATCGCAGTCACCAGCTGATCCGGCTGCAGCAGGAGCTCCTGCAGgagagcgtctctcctgctctcccctcctccctcgcTCACTGTTACCACCTGGAGGAGTGGGAGCGCCTCCGGGCCGAGAGGACGGAGCTTGACTCTCAGCGGCGCAGATTCCAGGAGGAAAGGCAGAGATTCACCGAGGCTGCCATCCGATTGGGCCAcgagcgCTGTCAGTTCGACCAGCAGAGGGCGTCGGTCCTGCAGCAGCAGTTCCTCAGTCTTTCGCCCAGCCCCCGTGGTCTGGATCAGGTGACCCCCTCTCGCTCTGGCCGGGCTGCAGCCTCCTCCCCGGGGTCAGCAGTCGCTTTGCAGAGACTGGTGAATAGGACACCCGCCTACACCCCCCCACCTGCACACAGCAGCACCAGCTGCAAAACACCAGTAGAGGGACACAAAGCCCAACAAGCCCCCGACACCAAGCAGTGCCAGGGCCCCAACATTGCAGGACCCAGCTTCCATGACCTCGTACAGCTGCCCAAGCGCAGGAAAGCCTCCGATTTAGTCCGATTTTCATGTGAAGACACTTGGGACCCCAGAGTTAGCAATGGCGGGAGAATAGACACCCCCTGCTCAGGACTGCAGTGGGTCACGCTGGTTCCCGCCAAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008363 True 1985 mRNA 0.63 14 60289 70750

Neighbor

gene id symbol gene type direction distance location
AMCG00008362 clpp,LOC107590418,LOC107753176,LOC106606781,LOC107724426 coding upstream 2415 55562 ~ 57874 (+)
AMCG00008361 NA coding upstream 16514 41639 ~ 43775 (+)
AMCG00008368 NA coding downstream 26819 97569 ~ 111307 (+)
AMCG00008367 cacna1ab coding downstream 56306 127056 ~ 127729 (+)
AMCG00008371 NA coding downstream 143895 214645 ~ 218875 (+)
AMCG00008372 trmt1 coding downstream 164145 234895 ~ 243054 (+)
AMCG00008374 mri1,LOC107594353,LOC107703717,LOC107700835,LOC107709591,LOC106595636 coding downstream 182729 253479 ~ 256222 (+)
G48618 NA non-coding downstream 23899 94649 ~ 97129 (+)
G48631 NA non-coding downstream 133731 204481 ~ 204901 (+)
G48636 NA non-coding downstream 151303 222053 ~ 222787 (+)
G48637 NA non-coding downstream 154515 225265 ~ 225944 (+)
G48647 wdr83 non-coding downstream 180557 251307 ~ 252482 (+)
AMCG00008369 NA other downstream 16567 87317 ~ 94561 (+)
AMCG00008375 cacna1a other downstream 82439 153189 ~ 204395 (+)
AMCG00008376 NA other downstream 189524 260274 ~ 263022 (+)
G48811 NA other downstream 402995 473745 ~ 551906 (+)
AMCG00008397 ccdc130 other downstream 446749 517499 ~ 525325 (+)

Expression


Co-expression Network