AMCG00008386



Basic Information


Item Value
gene id AMCG00008386
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 307986 ~ 311984 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00008386
TTTCCAACAGGCTGGATCTGTACATGGTTGGTGGTTTCCATGATGAGAGACGCATTTCCTCTGAGAACAGCATGATGCTTCTCAGGGAATTTATGAAGCAGGACATAGACATTAATCTTCAGCTGGCCTGTGTGTCAGAGCTCAATGATGTTGTCAAGGAAGAGAATCACTGGCCGAAAGTGTACGGCATCGGAGTTCAACTTCAAGGCCTGTCGATCTCTGTTTACCCAGCTAAATTTCCAACCAGACTACCTGAGACAAATCTCAGAGGAGCCAGACTCTCTATGGACAGAACGATGCGACGTGTGTACGACCAAACAAAAGGTGTACTGACCCTCGGGCCGTACACGTGGTTCGCAAATATTCTGAAGAGTGAGGATGCCAGCCGGAATTTGACGGACGGTGAAATCCGGAGGaaaTTTTCAACCTCCCCTCTGGTTGAAGAGCCAGAATTCCCACAAATGCTTCGGGATTCGTACAAGTACCTTGCTGACAATGTGATGCTTACTTCAACTGGGAAGATGCCTCTTGTGTATGAAATGAATGGCAATGGAGACTGGATCCTTCGCACCAACCTGtctcaataa

Function


GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation
ko05340 Primary immunodeficiency

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00008386 True 587 mRNA 0.47 6 307986 311984

Neighbor


gene id symbol gene type direction distance location
AMCG00008373 LOC104964355 coding upstream 34000 269760 ~ 273986 (+)
AMCG00008374 mri1,LOC107594353,LOC107703717,LOC107700835,LOC107709591,LOC106595636 coding upstream 51764 253479 ~ 256222 (+)
AMCG00008372 trmt1 coding upstream 64932 234895 ~ 243054 (+)
AMCG00008371 NA coding upstream 89111 214645 ~ 218875 (+)
AMCG00008367 cacna1ab coding upstream 180257 127056 ~ 127729 (+)
AMCG00008384 NA coding downstream 15639 327623 ~ 340268 (+)
AMCG00008389 NA coding downstream 29778 341762 ~ 344446 (+)
AMCG00008385 NA coding downstream 40582 352566 ~ 358341 (+)
AMCG00008390 evi5l,LOC108428244,LOC103150094,LOC106922548,LOC108258486 coding downstream 77624 389608 ~ 414932 (+)
AMCG00008391 NA coding downstream 113843 425827 ~ 427345 (+)
G48721 NA non-coding upstream 41105 266574 ~ 266881 (+)
G48720 NA non-coding upstream 43596 264020 ~ 264390 (+)
G48716 NA non-coding upstream 49722 257582 ~ 258264 (+)
G48647 wdr83 non-coding upstream 55504 251307 ~ 252482 (+)
G48637 NA non-coding upstream 82042 225265 ~ 225944 (+)
G48796 NA non-coding downstream 115897 427881 ~ 488584 (+)
G48803 NA non-coding downstream 126999 438983 ~ 444637 (+)
G48806 NA non-coding downstream 144665 456649 ~ 458299 (+)
G48818 NA non-coding downstream 176641 488625 ~ 489866 (+)
G48830 NA non-coding downstream 240483 552467 ~ 554260 (+)
AMCG00008376 NA other upstream 44964 260274 ~ 263022 (+)
AMCG00008375 cacna1a other upstream 103591 153189 ~ 204395 (+)
AMCG00008369 NA other upstream 213425 87317 ~ 94561 (+)
G48811 NA other downstream 161761 473745 ~ 551906 (+)
AMCG00008397 ccdc130 other downstream 205515 517499 ~ 525325 (+)
G48846 NA other downstream 275296 587280 ~ 588446 (+)
G49013 NA other downstream 564570 876554 ~ 879513 (+)
AMCG00008423 NA other downstream 653854 965838 ~ 968583 (+)

Expression



Co-expression Network