AMCG00008390 (evi5l,LOC108428244,LOC103150094,LOC106922548,LOC108258486)


Basic Information

Item Value
gene id AMCG00008390
gene name evi5l,LOC108428244,LOC103150094,LOC106922548,LOC108258486
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 389608 ~ 414932 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008390
ATGTCCAGTCCCCGGAGCAGCCCGCCCCCCCCCGTCCTGGACCCGGAGCCAGCGGGCAGCCCGGAGACAGATCGGCCGCTGTCCCCACCCCCCACGCTGGACGCAGAGCCCCTGTCCTCCGGCAGCCCCGCCCTCAGCCCTGACTCGTCCTCCCACGACGCCACGCTGTCGGCCGCCGCAGGCTCCCTGTGCGACTCTGAGAGCCTGAGCCCGGATGAGCTGGAGCTGCTGGCCAAACTGGAGGAGCAGAACAGCTCCTCGGCCAGCAGCAACCTGAGCCATCTGGAGGAGGACACCTGGATCCTGTGGGGACGCATCGTCAATGAGTGGGACGAGTGGAGGCGCAAGAAGGACAAGCTGCTCAAGgaGCTCATTCGGAAGGGCATCCCTCACCACTTCCGCGCCATCGTGTGGCAGCTGCTGGGCAACGCTACGGACATGCCCGTGAAGAACCAGTACTCGGAGCTGCTGAAGATGTCATCTCCCTGCGAGAAGCTCATCCGGCGGGACATCGCGCGCACCTACCCCGAGCACGACTTCTTCAAGGGCCAGGACAGCCTGGGCCAGGAGGTGCTCTTCAACGCCTACTCGCTGGTGGATCGGGAGGTGGGATACTGCCAGGGCAGCGCCTTCATCGTGGGACTACTGCTCATGCAGatgCCAGAGGAGGAGGCGTTCTGTGTATTTGTGCGTCTCATGCAGGAGTACAGGCTGAGGGAACTCTTCAAGCCCAGCATGGCTGAGCTGGGACTGTGCATCTACCAGTTCGAGTACCTGCTACAGgagcaGCTGCCAGAGCTCAATGTCCATTTCCGCTCTCAGAGTTTCCACACCTCCATGTACGCCTCCTCCTGGTTCCTCACGCTCTTCCTCACCTTCCTGCCGCTGCCCGTTGCCACTCGAGTGTTCGACATCTTCATGTATGAGGGTCTGGAGATTATATTCCGGGTGGGAATGGCCATCCTGCAGTACAACCAGACTGACCTCATTCAGCTGGACATGGAGGGGATGTCCCAGcacTTCCAGAAGGTCATCCCGCACCAGTTCGACAGCTGCCCCGACAAACTCATCCTGAGGGCCTACCAGGTCAAATACAACCCCAAGAAGATGAAGAAGCTGGAGAAGGAGTACACCACCATCAAGAACAAGGAGATGGAGGAGCAGATCGAGATCAAGGAGAGCGCTGCTCTGGCAGACAGACTGATCCAGGGTCAGGTGACCCGCGCTCTGGAGGCCGAGGAGAACTATGTGATCAAACGGGAGCTGGCGGTGGTCAGACAGCAGTGCAGCACGGCCAGCGAGAGTCTAGAGAGAGCGCAGCACACCATcacacagctgcagcagcaccAGtacACAGAGCAGTTTGTCAGTGGGCTGCAGACGGAGTTGGAACAGTCTCGTCTGCAGGAAGCCGAGCTCCTGGCTGCGCTGAAGGAGATGCAGGACAAGGTGCTGGACCTGGAGAAGAGGAACAGCTCCCTGCCGGACGAGACGAACCTGCCTTGGGTCCAGGAGGAGCTGAAGGCAGCGAAGCTGCGGGAGCTGGAGACGCTGAGCTCCTTCCGGGAGATGCAGGAGCAGGTGACCGAGCTCAACCAGCGCTGGCAGcaCCACATGTCCCGCGGGGGGGGGCACTGGAAGGAGTCCCCGCGGAAGCAGGCACTCAGTGAGCTGCAGGACAAGCTGATGGGGGTGCGGCTGCGCGAGGCCCAGGCGCAGGCCGAGCTCCGGGAGCTGAGACTGCGCACCCTGCAGCTGGAGAGCCAGGAGCAGGAGAGCGCCGCCCTGCAGGAGAGAGTGCACAGCCTCACAACACAGAACAAGAGCCTGCAGGGCCAGCTGAGCGAGATGAAGAGGAAGCAGACTGAGTTCGACTGCAAGagTAAGGAAGAGGTCATGGCAatccgGCAGCTGAAGGGACAGGCTCCGCGGTTCCAGCCCCAGGTGCGCGGGTTCGAGGGCCTGGGTCTGGCGGGGGGCGTGTCGGGGGGGGAGGCTGACTCCCTGAGCTCCGACGACGACCTGCTGCccagccccctgcccccccccgccGGCCTGTACCCCCCCGCGCGCCCCCCCTCCACCACTGCCTTTACAGAGGTCtggcctgccccccccccaccacagacACAGAGCCGCAGTCCTGCCCCCCCAGCACAAAACCCACaggacagacaggaagagagacGCAGACCAGCGGAGTCTGAAACGCTTTCCCAGGGACCGCCGCCCCCCACAGCATGGCCCATCTCTGCTCGGGGGCGGGGGCAGTAA

Function

symbol description
evi5l Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Predicted to act upstream of or within regulation of GTPase activity.

NR:

description
PREDICTED: EVI5-like protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008390 True 2274 mRNA 0.63 18 389608 414932

Neighbor

gene id symbol gene type direction distance location
AMCG00008385 NA coding upstream 31267 352566 ~ 358341 (+)
AMCG00008389 NA coding upstream 45162 341762 ~ 344446 (+)
AMCG00008384 NA coding upstream 49340 327623 ~ 340268 (+)
AMCG00008386 NA coding upstream 77624 307986 ~ 311984 (+)
AMCG00008373 LOC104964355 coding upstream 115622 269760 ~ 273986 (+)
AMCG00008391 NA coding downstream 10895 425827 ~ 427345 (+)
AMCG00008396 NA coding downstream 79308 494240 ~ 506457 (+)
AMCG00008395 NA coding downstream 92011 506943 ~ 509857 (+)
AMCG00008402 NA coding downstream 125181 540113 ~ 541044 (+)
AMCG00008403 rfx1,rfx1a,LOC108239327,LOC105013142 coding downstream 194101 609033 ~ 629437 (+)
G48721 NA non-coding upstream 122727 266574 ~ 266881 (+)
G48720 NA non-coding upstream 125218 264020 ~ 264390 (+)
G48716 NA non-coding upstream 131344 257582 ~ 258264 (+)
G48647 wdr83 non-coding upstream 137126 251307 ~ 252482 (+)
G48637 NA non-coding upstream 163664 225265 ~ 225944 (+)
G48796 NA non-coding downstream 12949 427881 ~ 488584 (+)
G48803 NA non-coding downstream 24051 438983 ~ 444637 (+)
G48806 NA non-coding downstream 41717 456649 ~ 458299 (+)
G48818 NA non-coding downstream 73693 488625 ~ 489866 (+)
G48830 NA non-coding downstream 137535 552467 ~ 554260 (+)
AMCG00008376 NA other upstream 126586 260274 ~ 263022 (+)
AMCG00008375 cacna1a other upstream 185213 153189 ~ 204395 (+)
AMCG00008369 NA other upstream 295047 87317 ~ 94561 (+)
G48811 NA other downstream 58813 473745 ~ 551906 (+)
AMCG00008397 ccdc130 other downstream 102567 517499 ~ 525325 (+)
G48846 NA other downstream 172348 587280 ~ 588446 (+)
G49013 NA other downstream 461622 876554 ~ 879513 (+)
AMCG00008423 NA other downstream 550906 965838 ~ 968583 (+)

Expression


Co-expression Network