AMCG00008402


Basic Information

Item Value
gene id AMCG00008402
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 540113 ~ 541044 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008402
ATGCCTGGACATGGGCAGAACTCAGGACGCAGGTGGACTGGTGTGCAGAACCTCAGTGGCTCCCCCTGCAGACTGCCCTTGGCAGTGcagacacagagacatggagacagagacacagacacaGAACTCACCCGTCCGCCCGCCTGCCCACTTCCTCTCACTGGCAGGAAGCGCTTAACGTCGTGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008402 True 189 mRNA 0.60 3 540113 541044

Neighbor

gene id symbol gene type direction distance location
AMCG00008395 NA coding upstream 30256 506943 ~ 509857 (+)
AMCG00008396 NA coding upstream 33656 494240 ~ 506457 (+)
AMCG00008391 NA coding upstream 112768 425827 ~ 427345 (+)
AMCG00008390 evi5l,LOC108428244,LOC103150094,LOC106922548,LOC108258486 coding upstream 125181 389608 ~ 414932 (+)
AMCG00008385 NA coding upstream 181772 352566 ~ 358341 (+)
AMCG00008403 rfx1,rfx1a,LOC108239327,LOC105013142 coding downstream 67989 609033 ~ 629437 (+)
AMCG00008410 NA coding downstream 168204 709248 ~ 712619 (+)
AMCG00008412 NA coding downstream 175051 716095 ~ 719874 (+)
AMCG00008411 NA coding downstream 234347 775391 ~ 778431 (+)
AMCG00008418 atp13a1 coding downstream 244382 785426 ~ 799063 (+)
G48818 NA non-coding upstream 50247 488625 ~ 489866 (+)
G48796 NA non-coding upstream 51529 427881 ~ 488584 (+)
G48806 NA non-coding upstream 81814 456649 ~ 458299 (+)
G48803 NA non-coding upstream 95476 438983 ~ 444637 (+)
G48721 NA non-coding upstream 273232 266574 ~ 266881 (+)
G48830 NA non-coding downstream 11423 552467 ~ 554260 (+)
G48915 NA non-coding downstream 88840 629884 ~ 632393 (+)
G48921 NA non-coding downstream 99832 640876 ~ 691037 (+)
G48947 NA non-coding downstream 153424 694468 ~ 696113 (+)
G48961 NA non-coding downstream 207554 748598 ~ 750602 (+)
AMCG00008397 ccdc130 other upstream 14788 517499 ~ 525325 (+)
AMCG00008376 NA other upstream 277091 260274 ~ 263022 (+)
AMCG00008375 cacna1a other upstream 335718 153189 ~ 204395 (+)
AMCG00008369 NA other upstream 445552 87317 ~ 94561 (+)
G48846 NA other downstream 46236 587280 ~ 588446 (+)
G49013 NA other downstream 335510 876554 ~ 879513 (+)
AMCG00008423 NA other downstream 424794 965838 ~ 968583 (+)
G49208 NA other downstream 781767 1322811 ~ 1324269 (+)
AMCG00008451 ubl5 other downstream 1084250 1625294 ~ 1628333 (+)

Expression


Co-expression Network