AMCG00008410


Basic Information

Item Value
gene id AMCG00008410
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 709248 ~ 712619 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008410
tctgtctctctctctctctttctctccctctctctgtctctctctctctctccctctcagcgGCAGTGGGGGGGGCAGTTCCGCAGTGGGGACAGGAAGCGCCGACACTCCCAGGCATCTGACGACCTGGACacccgacacacacacagcgcctCGGAGGACTCGCCCTGCGATGAGGATGACCACGAGGATGAGGTGAGTGCCCCCCAGGCCTGCTGCCAGCGGGGGGTTGAGCAGGAGCAGCTGTCTGGGGACACATCACAGCCCGCGGAGGAGAGAGCTGGGCCAGGCGCCGAGAAGAGGAGGCGGCGATGCAGTTCGCCTGCTCTCTCTTTCAGGACGGGTGAGGAGGCCGAGATCCAGACCCACCTTCAGAGTCGCTTCCACCAGGAGATCTGTCGCTTCCTGTCCTCCAAGATCCCAGAAGGCTCTGTGCGCTTCCTGCAGGAGTACATCGTGAACCGCAACAAGAAGATCCTGAAGAAGAGACAGGGGCTGTTCGACAAGGACCCTCCCCCGCCCAAGCAAGACCCCTTTTCTGGCGTGGACGAGCAGTGGTGCCGGCGCATCGAGGCGGCGCACTGCCGGGCCTGTGACATGATCATCCCGGCCCAGCGCAGCCTGCTGCACAGACACCTGTCCTCACAAGAGCACGTGCACAACCGCAAGAGCATCACAGACCAGTTTAAGAAGTCCAGTCTGCCCATTGCCAAGAGCATCCTGAACAACAGCAACATCAGCAAGATGCTGGACCGCTACCTGCAGGGGGAGGACCCGTTCACAGAGGATCAGGAGGCGGAGGAGGGCAGGGCGCCAGCCGCGGGGGCCGCGAGGGAGGCCGAGGAGGCACCGGGAGAaatgggagagggggagagtgagggacagagagaggaaggagtgAGGGAGGCCCCCACAGCAACCCGGGCAGCACCAGAATGCAGAGCGCTCGcggagggaagagagagggagggaggggtgccagtggagggagagagggaaggaggagtGGAAGAAGAGGTGCAGGAGGAagaacaggaggaggaggaagaggaggagaaccCCATGGCATAATCCTGGAAAGAgtgttaaattgtttattttattatcatgtAAGAAAAATTATTATACACACATTAACATTGTTAGATATATGTATGtctgcgtgtgtatgtgtgtgtgcgagtgtgtttACATACAGACCCTGCTAAATTAAACTGGGCAACTTTTGACACTGTGTcactggtcctgagagacacagtccagtccaggtGACTCTCCTGTATAAAATTGCTCCGGTACAATAGTACCCAACTTAACTGAAAAATAACCCAGTaactctaataataataacaacaatagaTAGTGTGTGAGGATAAGGTaggttattgttttgtgtattttacaaaaacTGACCCtgaatattttgaaagcaaCACTATTTGTtcgtattatcattattagagTTGGGAATGTCTGAGTCTTTGTTTGTGTCATAAACAGAAGtttgtactgtaaatatgaataacGATTACAATCATTTTAGTCTTTCCAATTCAACCTAAGATACCAAAACAGGTGCGCAGTGTGTGCGGGGACGGGGAGAGAGGAGGCTGTGTGGCCGTGCGCGGGAGGCGGGGCTGTAAAATACTTGTATTGTTCATTGCTAA

Function

GO: NA

KEGG:

id description
K16525 AKAP8; A-kinase anchor protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008410 True 1667 mRNA 0.54 9 709248 712619

Neighbor

gene id symbol gene type direction distance location
AMCG00008403 rfx1,rfx1a,LOC108239327,LOC105013142 coding upstream 79811 609033 ~ 629437 (+)
AMCG00008402 NA coding upstream 168204 540113 ~ 541044 (+)
AMCG00008395 NA coding upstream 199391 506943 ~ 509857 (+)
AMCG00008396 NA coding upstream 202791 494240 ~ 506457 (+)
AMCG00008391 NA coding upstream 281903 425827 ~ 427345 (+)
AMCG00008412 NA coding downstream 3476 716095 ~ 719874 (+)
AMCG00008411 NA coding downstream 62772 775391 ~ 778431 (+)
AMCG00008418 atp13a1 coding downstream 72807 785426 ~ 799063 (+)
AMCG00008417 NA coding downstream 94140 806759 ~ 813360 (+)
AMCG00008419 pbx4,LOC103392870 coding downstream 110059 822678 ~ 843135 (+)
G48947 NA non-coding upstream 13135 694468 ~ 696113 (+)
G48921 NA non-coding upstream 18211 640876 ~ 691037 (+)
G48915 NA non-coding upstream 76855 629884 ~ 632393 (+)
G48830 NA non-coding upstream 154988 552467 ~ 554260 (+)
G48818 NA non-coding upstream 219382 488625 ~ 489866 (+)
G48961 NA non-coding downstream 35979 748598 ~ 750602 (+)
G48996 NA non-coding downstream 53252 765871 ~ 783981 (+)
G49066 NA non-coding downstream 217087 929706 ~ 930827 (+)
G49069 NA non-coding downstream 220526 933145 ~ 936281 (+)
G49101 NA non-coding downstream 345942 1058561 ~ 1107290 (+)
G48846 NA other upstream 120802 587280 ~ 588446 (+)
G48811 NA other upstream 157342 473745 ~ 551906 (+)
AMCG00008397 ccdc130 other upstream 183923 517499 ~ 525325 (+)
AMCG00008376 NA other upstream 446226 260274 ~ 263022 (+)
AMCG00008375 cacna1a other upstream 504853 153189 ~ 204395 (+)
G49013 NA other downstream 163935 876554 ~ 879513 (+)
AMCG00008423 NA other downstream 253219 965838 ~ 968583 (+)
G49208 NA other downstream 610192 1322811 ~ 1324269 (+)
AMCG00008451 ubl5 other downstream 912675 1625294 ~ 1628333 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 1218035 1930654 ~ 1936502 (+)

Expression


Co-expression Network