Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008432 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 1052595 ~ 1055755 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042471 | ear morphogenesis | biological_process |
| GO:0042472 | inner ear morphogenesis | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008432 | True | 939 | mRNA | 0.64 | 8 | 1052595 | 1055755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008430 | NA | coding | upstream | 19284 | 1010395 ~ 1033311 (+) |
| AMCG00008431 | xab2 | coding | upstream | 57776 | 985977 ~ 994819 (+) |
| AMCG00008424 | NA | coding | upstream | 68939 | 976227 ~ 983656 (+) |
| AMCG00008429 | NA | coding | upstream | 101753 | 947657 ~ 950842 (+) |
| AMCG00008419 | pbx4,LOC103392870 | coding | upstream | 209460 | 822678 ~ 843135 (+) |
| AMCG00008433 | NA | coding | downstream | 20375 | 1076130 ~ 1078396 (+) |
| AMCG00008441 | NA | coding | downstream | 183609 | 1239364 ~ 1245755 (+) |
| AMCG00008445 | NA | coding | downstream | 201766 | 1257521 ~ 1260216 (+) |
| AMCG00008446 | NA | coding | downstream | 224873 | 1280628 ~ 1288082 (+) |
| AMCG00008444 | col5a3,LOC106593482 | coding | downstream | 259852 | 1315607 ~ 1322747 (+) |
| G49069 | NA | non-coding | upstream | 116314 | 933145 ~ 936281 (+) |
| G49066 | NA | non-coding | upstream | 121768 | 929706 ~ 930827 (+) |
| G48996 | NA | non-coding | upstream | 268614 | 765871 ~ 783981 (+) |
| G48961 | NA | non-coding | upstream | 301993 | 748598 ~ 750602 (+) |
| G48947 | NA | non-coding | upstream | 356482 | 694468 ~ 696113 (+) |
| G49101 | NA | non-coding | downstream | 2806 | 1058561 ~ 1107290 (+) |
| G49102 | NA | non-coding | downstream | 7794 | 1063549 ~ 1068033 (+) |
| G49097 | NA | non-coding | downstream | 24266 | 1080021 ~ 1117780 (+) |
| G49107 | NA | non-coding | downstream | 30815 | 1086570 ~ 1087158 (+) |
| G49110 | LOC108429650,LOC105905712,LOC104952487 | non-coding | downstream | 36966 | 1092721 ~ 1096634 (+) |
| AMCG00008423 | NA | other | upstream | 84012 | 965838 ~ 968583 (+) |
| G49013 | NA | other | upstream | 173082 | 876554 ~ 879513 (+) |
| G48846 | NA | other | upstream | 464149 | 587280 ~ 588446 (+) |
| G48811 | NA | other | upstream | 500689 | 473745 ~ 551906 (+) |
| G49208 | NA | other | downstream | 267056 | 1322811 ~ 1324269 (+) |
| AMCG00008451 | ubl5 | other | downstream | 569539 | 1625294 ~ 1628333 (+) |
| G49298 | s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 | other | downstream | 874899 | 1930654 ~ 1936502 (+) |
| AMCG00008473 | NA | other | downstream | 1006801 | 2062556 ~ 2075649 (+) |
| AMCG00008475 | NA | other | downstream | 1032725 | 2088480 ~ 2107792 (+) |
