Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008441 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 1239364 ~ 1245755 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008441 | True | 1020 | mRNA | 0.61 | 5 | 1239364 | 1245755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008433 | NA | coding | upstream | 160968 | 1076130 ~ 1078396 (+) |
| AMCG00008432 | NA | coding | upstream | 183609 | 1052595 ~ 1055755 (+) |
| AMCG00008430 | NA | coding | upstream | 206053 | 1010395 ~ 1033311 (+) |
| AMCG00008431 | xab2 | coding | upstream | 244545 | 985977 ~ 994819 (+) |
| AMCG00008424 | NA | coding | upstream | 255708 | 976227 ~ 983656 (+) |
| AMCG00008445 | NA | coding | downstream | 11766 | 1257521 ~ 1260216 (+) |
| AMCG00008446 | NA | coding | downstream | 34873 | 1280628 ~ 1288082 (+) |
| AMCG00008444 | col5a3,LOC106593482 | coding | downstream | 69852 | 1315607 ~ 1322747 (+) |
| AMCG00008447 | NA | coding | downstream | 198422 | 1444177 ~ 1444458 (+) |
| AMCG00008449 | NA | coding | downstream | 226933 | 1472688 ~ 1473983 (+) |
| G49178 | NA | non-coding | upstream | 76674 | 1162483 ~ 1162690 (+) |
| G49097 | NA | non-coding | upstream | 121584 | 1080021 ~ 1117780 (+) |
| G49101 | NA | non-coding | upstream | 132074 | 1058561 ~ 1107290 (+) |
| G49110 | LOC108429650,LOC105905712,LOC104952487 | non-coding | upstream | 142730 | 1092721 ~ 1096634 (+) |
| G49107 | NA | non-coding | upstream | 152206 | 1086570 ~ 1087158 (+) |
| G49221 | NA | non-coding | downstream | 260958 | 1506713 ~ 1506935 (+) |
| G49233 | NA | non-coding | downstream | 384185 | 1629940 ~ 1631543 (+) |
| G49236 | NA | non-coding | downstream | 396675 | 1642430 ~ 1741577 (+) |
| G49261 | NA | non-coding | downstream | 554106 | 1799861 ~ 1856256 (+) |
| G49264 | NA | non-coding | downstream | 558070 | 1803825 ~ 1806027 (+) |
| AMCG00008423 | NA | other | upstream | 270781 | 965838 ~ 968583 (+) |
| G49013 | NA | other | upstream | 359851 | 876554 ~ 879513 (+) |
| G48846 | NA | other | upstream | 650918 | 587280 ~ 588446 (+) |
| G48811 | NA | other | upstream | 687458 | 473745 ~ 551906 (+) |
| G49208 | NA | other | downstream | 77056 | 1322811 ~ 1324269 (+) |
| AMCG00008451 | ubl5 | other | downstream | 379539 | 1625294 ~ 1628333 (+) |
| G49298 | s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 | other | downstream | 684899 | 1930654 ~ 1936502 (+) |
| AMCG00008473 | NA | other | downstream | 816801 | 2062556 ~ 2075649 (+) |
| AMCG00008475 | NA | other | downstream | 842725 | 2088480 ~ 2107792 (+) |
