AMCG00008445


Basic Information

Item Value
gene id AMCG00008445
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1257521 ~ 1260216 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008445
ATGGAGATCTTGAGGTTGGAAGATAGGCAGTGGACACGGGGGTCCTTTGGGGATCTGAGTTTGAGAACCCTGGGAGAGAGAACCCAGGAACCCATCTGTTTCCGTTCATTCCTGTTCTCTCCCTACCCTCTCTCGCGCTCTCTTGTGTTTTACCATttcttgttctgttttcttCATGTCCCATCCTCTCCCTACCAACGACAATCCCCGCCCTTCTCCGTCCCCGTGCAGAAAGGGTCAGAGCCCCCCCCCAACGACGAGCCGGATGAAAAACCCCAAAAACGTGACCGACAAGACAGGAAGGCCAAATCCAAGAAGAACAGGGACAGGTCCTCTAAGAAGAAGGGCAGGAAGGAGTCtaggaagaagagaaaagaggaCCCTGGGCCCGAGGAGGGGTTTTTAGAGGTGGTCACGGCATTGCCTGAATATTTTTATGAGGGACCTCTGGAAAACACCACATTCCCTAAGACAGATGAGGCCCCTTGGGAGTCCACTGCCCTGCCTGAGTCAACACAGGACCCGCTTTCGCTCCCTTGGGAGTCCACTGCCCTGCCTGAGTCAACACAGGACCCCTCTTTGCCCCCTTGGGAGTCCACCGCCCTGCCTGAATCAACACATGACCCCCTTTCACTCCCTTGGGAGTCCACCGCCCTGCCTGAGTCAACACAGGACCCCTCTTTGCCCCCTTGGGCGTCCACAACCCTGCCTGAGTCAACACAGAACCCTTCTTTGCTGTCCACTTCCCTGCCCGTACCAACTCTAGAAGTCTCTCTGGCATCCGTGTCGCTGCCCGAATCCACTTTTGAGACCCTCGTGGTGTCCACGCTGCTGCCTGACTCCCCAGTGACCGGGGAAGAGGTGGAGAAGCCGGTGAAGGAGCCAGAGGTGGAGGACTTCAACGAGGACTACTACAACGCGCTCTACGAGGACCTCGACGTCTCCACCGTGACCGTAGGGCCCAACGTCACGGAGTATGAGGTCGTGGAGTACGAGGACGGGAGCCCCCCCGACCGGCAGCCGGAGGTGCAGGAGTACGAGGTGCAGGAGTACGAGGAATACGAGGAGTACGACGACCGCTACGGCTGGGTGGAGAGGGAGGACGCCGAGACCAGGGATGTGCAGGAAAGGTTGCAGAGACCGGAGAAGGGAGAGAAGGGAGAACCCGCGATTATTGAACCAGGGATGTTGGTGCAGGGACCCCCGGGACCACCCGGTCCAGAGGTGAGTGAGCGTCCCGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008445 True 1245 mRNA 0.58 5 1257521 1260216

Neighbor

gene id symbol gene type direction distance location
AMCG00008441 NA coding upstream 11766 1239364 ~ 1245755 (+)
AMCG00008433 NA coding upstream 179125 1076130 ~ 1078396 (+)
AMCG00008432 NA coding upstream 201766 1052595 ~ 1055755 (+)
AMCG00008430 NA coding upstream 224210 1010395 ~ 1033311 (+)
AMCG00008431 xab2 coding upstream 262702 985977 ~ 994819 (+)
AMCG00008446 NA coding downstream 20412 1280628 ~ 1288082 (+)
AMCG00008444 col5a3,LOC106593482 coding downstream 55391 1315607 ~ 1322747 (+)
AMCG00008447 NA coding downstream 183961 1444177 ~ 1444458 (+)
AMCG00008449 NA coding downstream 212472 1472688 ~ 1473983 (+)
AMCG00008448 NA coding downstream 224794 1485010 ~ 1486403 (+)
G49178 NA non-coding upstream 94831 1162483 ~ 1162690 (+)
G49097 NA non-coding upstream 139741 1080021 ~ 1117780 (+)
G49110 LOC108429650,LOC105905712,LOC104952487 non-coding upstream 160887 1092721 ~ 1096634 (+)
G49107 NA non-coding upstream 170363 1086570 ~ 1087158 (+)
G49102 NA non-coding upstream 189488 1063549 ~ 1068033 (+)
G49221 NA non-coding downstream 246497 1506713 ~ 1506935 (+)
G49233 NA non-coding downstream 369724 1629940 ~ 1631543 (+)
G49236 NA non-coding downstream 382214 1642430 ~ 1741577 (+)
G49261 NA non-coding downstream 539645 1799861 ~ 1856256 (+)
G49264 NA non-coding downstream 543609 1803825 ~ 1806027 (+)
AMCG00008423 NA other upstream 288938 965838 ~ 968583 (+)
G49013 NA other upstream 378008 876554 ~ 879513 (+)
G48846 NA other upstream 669075 587280 ~ 588446 (+)
G48811 NA other upstream 705615 473745 ~ 551906 (+)
G49208 NA other downstream 62595 1322811 ~ 1324269 (+)
AMCG00008451 ubl5 other downstream 365078 1625294 ~ 1628333 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 670438 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 802340 2062556 ~ 2075649 (+)
AMCG00008475 NA other downstream 828264 2088480 ~ 2107792 (+)

Expression


Co-expression Network