AMCG00008447


Basic Information

Item Value
gene id AMCG00008447
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1444177 ~ 1444458 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008447
ATGACGGTGCCACTGCTGAAGATAGGCGCCGTGCTCAGTACGATGGCCATGGTGACTAACTGGATGTCCCAGACGCTGCCGTCGCTCGTGGGACTCAACGGGACCACCATTTCGCGCGGGGGGACGTCCGAGAAAATCGTGAGTGTGGGTAACAAACTCGTTCCTTTTCACGCAGGGAGGGGGCGGGCTGTGGTGGTTGGGTTTGGGAGCTGGGGGGCGGTGGCTGTTTTGCTTGTGGTCTCAGAAGGAGGGTCTGCACTTTTTCGCGATGCTGTCCTGTAG

Function

GO:

id name namespace
GO:0014032 neural crest cell development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008447 True 282 mRNA 0.60 1 1444177 1444458

Neighbor

gene id symbol gene type direction distance location
AMCG00008444 col5a3,LOC106593482 coding upstream 121430 1315607 ~ 1322747 (+)
AMCG00008446 NA coding upstream 156095 1280628 ~ 1288082 (+)
AMCG00008445 NA coding upstream 183961 1257521 ~ 1260216 (+)
AMCG00008441 NA coding upstream 198422 1239364 ~ 1245755 (+)
AMCG00008433 NA coding upstream 365781 1076130 ~ 1078396 (+)
AMCG00008449 NA coding downstream 28230 1472688 ~ 1473983 (+)
AMCG00008448 NA coding downstream 40552 1485010 ~ 1486403 (+)
AMCG00008450 olfm2,LOC104918560,LOC100706999 coding downstream 52763 1497221 ~ 1506574 (+)
AMCG00008455 NA coding downstream 266659 1711117 ~ 1716867 (+)
AMCG00008454 NA coding downstream 273714 1718172 ~ 1737515 (+)
G49178 NA non-coding upstream 281487 1162483 ~ 1162690 (+)
G49097 NA non-coding upstream 326397 1080021 ~ 1117780 (+)
G49110 LOC108429650,LOC105905712,LOC104952487 non-coding upstream 347543 1092721 ~ 1096634 (+)
G49107 NA non-coding upstream 357019 1086570 ~ 1087158 (+)
G49102 NA non-coding upstream 376144 1063549 ~ 1068033 (+)
G49221 NA non-coding downstream 62255 1506713 ~ 1506935 (+)
G49233 NA non-coding downstream 185482 1629940 ~ 1631543 (+)
G49236 NA non-coding downstream 197972 1642430 ~ 1741577 (+)
G49261 NA non-coding downstream 355403 1799861 ~ 1856256 (+)
G49264 NA non-coding downstream 359367 1803825 ~ 1806027 (+)
G49208 NA other upstream 119908 1322811 ~ 1324269 (+)
AMCG00008423 NA other upstream 475594 965838 ~ 968583 (+)
G49013 NA other upstream 564664 876554 ~ 879513 (+)
G48846 NA other upstream 855731 587280 ~ 588446 (+)
G48811 NA other upstream 892271 473745 ~ 551906 (+)
AMCG00008451 ubl5 other downstream 180836 1625294 ~ 1628333 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 486196 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 618098 2062556 ~ 2075649 (+)
AMCG00008475 NA other downstream 644022 2088480 ~ 2107792 (+)
AMCG00008476 NA other downstream 683257 2127715 ~ 2143394 (+)

Expression


Co-expression Network