AMCG00008448


Basic Information

Item Value
gene id AMCG00008448
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1485010 ~ 1486403 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008448
ATGACACTTAATCTGCGGTCTCCCCAGATCTTCCCAACGGCAGGACCCCCCGGGGGGATGCCGGTACAGAACATCACCCAGTCCATGGAAGTGCTGGACCTGCGGACGTACCGGGACCTGCAGTACATCAGGAACACCGAGTCCCAGATGAAGGTCCTGGACAGCCGGTTGAAAGTGGCCTCGGACAGCCCCAAGACCCTGAACCCCAAGAGCTTTCAGGCTTCCCGCTGGTTCAACATCCGTGTGAAGATCGTGCCGGTGGATTACAGCACAGCCGACACAATTGACATTCAATCCTACCGCCTTGGTACGGCCCTTAATCCTATCCGAGGGGCAAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008448 True 342 mRNA 0.58 3 1485010 1486403

Neighbor

gene id symbol gene type direction distance location
AMCG00008449 NA coding upstream 11027 1472688 ~ 1473983 (+)
AMCG00008447 NA coding upstream 40552 1444177 ~ 1444458 (+)
AMCG00008444 col5a3,LOC106593482 coding upstream 162263 1315607 ~ 1322747 (+)
AMCG00008446 NA coding upstream 196928 1280628 ~ 1288082 (+)
AMCG00008445 NA coding upstream 224794 1257521 ~ 1260216 (+)
AMCG00008450 olfm2,LOC104918560,LOC100706999 coding downstream 10818 1497221 ~ 1506574 (+)
AMCG00008455 NA coding downstream 224714 1711117 ~ 1716867 (+)
AMCG00008454 NA coding downstream 231769 1718172 ~ 1737515 (+)
AMCG00008459 NA coding downstream 308408 1794811 ~ 1795802 (+)
AMCG00008461 NA coding downstream 309941 1796344 ~ 1801758 (+)
G49178 NA non-coding upstream 322320 1162483 ~ 1162690 (+)
G49097 NA non-coding upstream 367230 1080021 ~ 1117780 (+)
G49110 LOC108429650,LOC105905712,LOC104952487 non-coding upstream 388376 1092721 ~ 1096634 (+)
G49107 NA non-coding upstream 397852 1086570 ~ 1087158 (+)
G49102 NA non-coding upstream 416977 1063549 ~ 1068033 (+)
G49221 NA non-coding downstream 20310 1506713 ~ 1506935 (+)
G49233 NA non-coding downstream 143537 1629940 ~ 1631543 (+)
G49236 NA non-coding downstream 156027 1642430 ~ 1741577 (+)
G49261 NA non-coding downstream 313458 1799861 ~ 1856256 (+)
G49264 NA non-coding downstream 317422 1803825 ~ 1806027 (+)
G49208 NA other upstream 160741 1322811 ~ 1324269 (+)
AMCG00008423 NA other upstream 516427 965838 ~ 968583 (+)
G49013 NA other upstream 605497 876554 ~ 879513 (+)
G48846 NA other upstream 896564 587280 ~ 588446 (+)
AMCG00008397 ccdc130 other upstream 959685 517499 ~ 525325 (+)
AMCG00008451 ubl5 other downstream 138891 1625294 ~ 1628333 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 444251 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 576153 2062556 ~ 2075649 (+)
AMCG00008475 NA other downstream 602077 2088480 ~ 2107792 (+)
AMCG00008476 NA other downstream 641312 2127715 ~ 2143394 (+)

Expression


Co-expression Network