AMCG00008449


Basic Information

Item Value
gene id AMCG00008449
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1472688 ~ 1473983 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008449
ATGACGATAACATACACCTGGCCTCTGAACACCTGTCTGGACATCAGCTTTCTTTTTGGATTGGGTGTAGAGaCCCTGTTCCCTAGCCCGGAGGAAGGGTGGCAGATCTACAGCTCAGCCCAAGACCCAGACGGGAAGTGTATCTGCACCGTTGTGGCTCCTGCGCAGAGCATGTGTACCCGAGACCCCCGCAGCAGGCAGCTCCGACAGCTCATGGAGAAGTTGCACTCCCCCGTGCTACTGACCATCTGTCCGTCAGTCCCTCCCAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008449 True 273 mRNA 0.57 3 1472688 1473983

Neighbor

gene id symbol gene type direction distance location
AMCG00008447 NA coding upstream 28230 1444177 ~ 1444458 (+)
AMCG00008444 col5a3,LOC106593482 coding upstream 149941 1315607 ~ 1322747 (+)
AMCG00008446 NA coding upstream 184606 1280628 ~ 1288082 (+)
AMCG00008445 NA coding upstream 212472 1257521 ~ 1260216 (+)
AMCG00008441 NA coding upstream 226933 1239364 ~ 1245755 (+)
AMCG00008448 NA coding downstream 11027 1485010 ~ 1486403 (+)
AMCG00008450 olfm2,LOC104918560,LOC100706999 coding downstream 23238 1497221 ~ 1506574 (+)
AMCG00008455 NA coding downstream 237134 1711117 ~ 1716867 (+)
AMCG00008454 NA coding downstream 244189 1718172 ~ 1737515 (+)
AMCG00008459 NA coding downstream 320828 1794811 ~ 1795802 (+)
G49178 NA non-coding upstream 309998 1162483 ~ 1162690 (+)
G49097 NA non-coding upstream 354908 1080021 ~ 1117780 (+)
G49110 LOC108429650,LOC105905712,LOC104952487 non-coding upstream 376054 1092721 ~ 1096634 (+)
G49107 NA non-coding upstream 385530 1086570 ~ 1087158 (+)
G49102 NA non-coding upstream 404655 1063549 ~ 1068033 (+)
G49221 NA non-coding downstream 32730 1506713 ~ 1506935 (+)
G49233 NA non-coding downstream 155957 1629940 ~ 1631543 (+)
G49236 NA non-coding downstream 168447 1642430 ~ 1741577 (+)
G49261 NA non-coding downstream 325878 1799861 ~ 1856256 (+)
G49264 NA non-coding downstream 329842 1803825 ~ 1806027 (+)
G49208 NA other upstream 148419 1322811 ~ 1324269 (+)
AMCG00008423 NA other upstream 504105 965838 ~ 968583 (+)
G49013 NA other upstream 593175 876554 ~ 879513 (+)
G48846 NA other upstream 884242 587280 ~ 588446 (+)
AMCG00008397 ccdc130 other upstream 947363 517499 ~ 525325 (+)
AMCG00008451 ubl5 other downstream 151311 1625294 ~ 1628333 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 456671 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 588573 2062556 ~ 2075649 (+)
AMCG00008475 NA other downstream 614497 2088480 ~ 2107792 (+)
AMCG00008476 NA other downstream 653732 2127715 ~ 2143394 (+)

Expression


Co-expression Network