AMCG00008455


Basic Information

Item Value
gene id AMCG00008455
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1711117 ~ 1716867 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008455
ATGAATCAGTGTAGTCCCGAGGAGGCCGTGCCGCACCACAGCCACTCAGGAGGGTACGGCCTGTGCAGGAGGGAGCGGCTGAGCTACACGGAGGAGCCAGACCTGAAGGACGACGACTATCTGTGTGAACCCTATTCCTGGACGAGTGCGAGGTCCACGGATTCCCCCTCTTCGTGGCTGACACTCCCGCAGCGCCGGGCTCGGCACATTCTGCCCCCGGGCCTGACCGTGGAGGAGTCCGGCATCCCTGGCACGGGCCTGGGGGTGTTCAATCGGGGCGCCCCCATCCCCAGAGGGGTGCACTACAGACCCTATGAGGGGCAGCTGGCCAGCGAGGAGGAAGCCGTGCTCAGTGCCTACTCTTGGGTGggcaTAAATCGAAGGGGGACCcctgcaggcaggcaggcgagGGAGGCGAGGCAGGACACAGCAGTGAGGGGACGAGAGGAGGAGAACACTCTGCGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008455 True 468 mRNA 0.65 5 1711117 1716867

Neighbor

gene id symbol gene type direction distance location
AMCG00008450 olfm2,LOC104918560,LOC100706999 coding upstream 204543 1497221 ~ 1506574 (+)
AMCG00008448 NA coding upstream 224714 1485010 ~ 1486403 (+)
AMCG00008449 NA coding upstream 237134 1472688 ~ 1473983 (+)
AMCG00008447 NA coding upstream 266659 1444177 ~ 1444458 (+)
AMCG00008444 col5a3,LOC106593482 coding upstream 388370 1315607 ~ 1322747 (+)
AMCG00008454 NA coding downstream 1305 1718172 ~ 1737515 (+)
AMCG00008459 NA coding downstream 77944 1794811 ~ 1795802 (+)
AMCG00008461 NA coding downstream 79477 1796344 ~ 1801758 (+)
AMCG00008458 NA coding downstream 157170 1874037 ~ 1880962 (+)
AMCG00008460 NA coding downstream 167500 1884367 ~ 1889767 (+)
G49233 NA non-coding upstream 79574 1629940 ~ 1631543 (+)
G49221 NA non-coding upstream 204182 1506713 ~ 1506935 (+)
G49178 NA non-coding upstream 548427 1162483 ~ 1162690 (+)
G49097 NA non-coding upstream 593337 1080021 ~ 1117780 (+)
G49110 LOC108429650,LOC105905712,LOC104952487 non-coding upstream 614483 1092721 ~ 1096634 (+)
G49261 NA non-coding downstream 82994 1799861 ~ 1856256 (+)
G49264 NA non-coding downstream 86958 1803825 ~ 1806027 (+)
G49270 NA non-coding downstream 98717 1815584 ~ 1848738 (+)
G49271 NA non-coding downstream 121319 1838186 ~ 1839004 (+)
G49294 NA non-coding downstream 191956 1908823 ~ 1910419 (+)
AMCG00008451 ubl5 other upstream 82784 1625294 ~ 1628333 (+)
G49208 NA other upstream 386848 1322811 ~ 1324269 (+)
AMCG00008423 NA other upstream 742534 965838 ~ 968583 (+)
G49013 NA other upstream 831604 876554 ~ 879513 (+)
G48846 NA other upstream 1122671 587280 ~ 588446 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 213787 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 345689 2062556 ~ 2075649 (+)
AMCG00008475 NA other downstream 371613 2088480 ~ 2107792 (+)
AMCG00008476 NA other downstream 410848 2127715 ~ 2143394 (+)
G49340 cdc37 other downstream 492616 2209483 ~ 2211514 (+)

Expression


Co-expression Network