AMCG00008463


Basic Information

Item Value
gene id AMCG00008463
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1862614 ~ 1870208 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008463
atgacagacagacagaagtcCACTGCCCTGCTTCTGCTCTTGCTGATGTGCGTCGGTGGGGTCCTCCCCAGTAATGAGATGGAGAGACggaggagggagaaggagaaggagaagacaaatggggaaggaggaggaggaagcggAGGACAGGAGGGGCGTGAGGCCTCTCAGAAGCGACAATCCCGTTCCTCTGAGCACAAGATGGCGACAGGGGCAACGGGGGCGACGGGGGCGACGGGGAGTGGGAAATGCTCCTACACGTTCATCGTCCCCCAGCAGAGGCTGACGGGGGCGCTGTGCCTGAATACCCGGGGGGGAGCAGAGGAGGGGCCGCTGAACGCCACGGAGCTGGCCGAGCTGCGGGCCCAGGTggggcggcagcagcagcagctggagcAGCTCCGGCAGCAGGTGGAGGTGGACGGCGGGCTGGCGGGGGAGGTCCGCCTCCTGCGCAAGGAGAGCCGCAACATGAATGCCCGCATCACCCAGCTGTACGCCCAGCTGCTCCATGAGATCATCCACAGGAAGGACCGGAGCCTGGAGGCCGTGCAGCTGGAACAGCGCCTGCTCAACACCACCGCGCAGGTGCTGCAGGTGACCGCCAACTACCAAGAGCTGGAGAGGAAATATGCCACCCTGGTGTCCCTCATCAGCAACCAGAGCCTGTTGGTCGCCCGCCTGGAGAGACACTGCCAGCCCACCACTGCCAGCACTGCCCCACCGCAGCCACCACAGGTGCTAGGGATGCCTCCGTCCGGGAGCCCGAACGGCAGCAACGACATCCAGAGAGACCAGAACCAGAGCCCCTGGGTAACCCCGGAGTCCCCTCCCCGGCCCCCCAACACCAGCCCTAGCCCCAGCCCCCACACTGACCGCCCCTTCGTTGGCTACTCCGCCACCAAGTCCCCAGGGCCCTGGCAAGATTGTCAGCACGTGCTGGAGGCCGGTGAGACGGACAGCGGGATCTACCTGCTCCGCCCACGCAACGCCAACCGTCTGATGCAGGCGTGGTGCGAACAGAGCCAGGCCCAGGGCGGCTGGACGGTCATCCAGAGGCGGCTGGACGGCTCGGTCAATTTCTTCAGGACCTGGGAGCACTACAAGCAAGGCTTTGGAAACCTGGACGGAGAGTACTGGCTGGGGCTGGAGCACCTGTACTGGCTGACCGCGCAGGGGGACTACCGCCTGCGTGTGGCGCTGGAGGACTGGCAGGGCCGCCACGTCTACGCTGAGTACGACAGCTTCCGCCTGGAGCCCGAGAGCGACTGGTACCGGCTGCGGCTCGGGGAGTACCAAGGCGACGCCGGCGACTCGCTCTCCTGGCACAACAACAAGGCCTTCACCACCCTGGACCGTGACCGCGATGCCTACGCTGGAAACTGTGCCCACTACCAGAAAGGAGGCTGGTGGTACCACATGTGCGCCCACTCCAACCTGAATGGTGTGTGGTACAAGGGTGGGCACTACCGCAGCCGCTACCAGGACGGAGTGTACTGGGCCGAGTTCCGGGGGGGGTCTTACTCCCTGAAGAAAGTCACCATGATGATCAAGGCCACCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008463 True 1563 mRNA 0.65 6 1862614 1870208

Neighbor

gene id symbol gene type direction distance location
AMCG00008467 NA coding downstream 50920 1809871 ~ 1811694 (-)
AMCG00008465 NA coding downstream 54098 1804929 ~ 1808516 (-)
AMCG00008464 NA coding downstream 59529 1796566 ~ 1803085 (-)
AMCG00008457 NA coding downstream 97536 1741434 ~ 1765078 (-)
AMCG00008456 NA coding downstream 169578 1680827 ~ 1693036 (-)
AMCG00008470 dnmt1 coding upstream 25954 1896162 ~ 1913755 (-)
AMCG00008469 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 coding upstream 65096 1935304 ~ 1936419 (-)
AMCG00008471 NA coding upstream 80452 1950660 ~ 1951836 (-)
AMCG00008477 NA coding upstream 282403 2152611 ~ 2165650 (-)
AMCG00008482 NA coding upstream 299123 2169331 ~ 2172673 (-)
G49346 NA non-coding downstream 123285 1738280 ~ 1739329 (-)
G49232 NA non-coding downstream 234249 1626287 ~ 1628365 (-)
G49211 NA non-coding downstream 538345 1321891 ~ 1324269 (-)
G49210 NA non-coding downstream 541635 1320763 ~ 1320979 (-)
G49209 NA non-coding downstream 542743 1319610 ~ 1319871 (-)
G49389 NA non-coding upstream 184307 2054515 ~ 2066295 (-)
G49393 NA non-coding upstream 197875 2068083 ~ 2075648 (-)
G49394 NA non-coding upstream 199582 2069790 ~ 2070872 (-)
G49414 NA non-coding upstream 366319 2236527 ~ 2236861 (-)
G49419 NA non-coding upstream 489652 2359860 ~ 2360112 (-)
AMCG00008462 NA other downstream 3123 1798845 ~ 1859491 (-)
AMCG00008466 NA other downstream 22515 1819774 ~ 1840099 (-)
AMCG00008452 NA other downstream 207135 1629854 ~ 1655479 (-)
AMCG00008428 NA other downstream 921942 928937 ~ 940672 (-)
G49054 NA other downstream 1014568 841883 ~ 848046 (-)
G49375 NA other upstream 9413 1879621 ~ 1880962 (-)
AMCG00008474 NA other upstream 203575 2073783 ~ 2085025 (-)
AMCG00008491 prkcsh,LOC102779661 other upstream 766707 2636915 ~ 2702422 (-)
G49605 NA other upstream 1036467 2906675 ~ 2908665 (-)
AMCG00008554 NA other upstream 1560606 3430814 ~ 3871269 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026808 angptl6 coding NC_007114.7 CM002887.2 54524227 ~ 54544612 (-)
grasscarp (Ctenopharyngodon idella) CI01000113_00629848_00638123 ANGPTL6 coding CI01000113 null 628843 ~ 638432 (+)